Fang, L., Sahana, G., Ma, P., Su, G., Yu, Y., Zhang, S.
, Lund, M. S. & Sørensen, P. (2017).
Exploring the genetic architecture and improving genomic prediction accuracy for mastitis and milk production traits in dairy cattle by mapping variants to hepatic transcriptomic regions responsive to intra-mammary infection.
Genetics Selection Evolution,
49, Artikel 44.
https://doi.org/10.1186/s12711-017-0319-0
Reyer, H.
, Shirali, M., Ponsuksili, S., Murani, E., Varley, P. F.
, Jensen, J. & Wimmers, K. (2017).
Exploring the genetics of feed efficiency and feeding behaviour traits in a pig line highly selected for performance characteristics.
Molecular Genetics and Genomics,
292(5), 1001-1011.
https://doi.org/10.1007/s00438-017-1325-1Shetty, N.
, Difford, G., Lassen, J.
, Løvendahl, P. & Buitenhuis, A. J. (2017).
Feasibility of FT-IR-milk spectra to predict methane emissions in danish lactating dairy cows. 199. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Villumsen, T. M., Cai, Z., Sahana, G., Guldbrandtsen, B., Asp, T. & Lund, M. S. (2017).
Gener i kortlagte genområder påvirker størrelse, kvalitet og reproduktion. I S. H. Møller & J. Malmkvist (red.),
Temadag om aktuel minkforskning (Bind 103, s. 32-40). DCA - Nationalt Center for Fødevarer og Jordbrug,.
http://pure.au.dk/portal/files/116891581/DCArapport103.pdf
Løvendahl, P., Lauritsen, U., Hansen, L. F., Persson, J.
& Sarup, P. M. (2017).
Genetic assessment of intra-individual animal variation in milking order of Jersey cows. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Rovere, G., Ducro, B. J., van Arendonk, J. A. M.
, Norberg, E. & Madsen, P. (2017).
Genetic correlations between dressage, show jumping and studbook-entry inspection traits in a process of specialization in Dutch Warmblood horses.
Journal of Animal Breeding and Genetics,
134(2), 162-171.
https://doi.org/10.1111/jbg.12241
Poulsen, N. A., Buitenhuis, A. J., C. Robinson, R., Barile, D.
& Larsen, L. B. (2017).
Genetic parameter estimation for bovine milk oligosaccharides in Danish dairy breeds. Abstract fra 14th International Symposium on Milk Genomics and Human Health, Québec City, Canada.
Poulsen, N. A., Buitenhuis, A. J., C. Robinson, R., Barile, D.
& Larsen, L. B. (2017).
Genetic parameter estimation of bovine milk oligosaccharides in Danish dairy breeds. Abstract fra Conference on milk composistion, functional genomics and health aspects, Larkollen, Norge.
Liu, A., Wang, Y.
, Sahana, G., Zhang, Q., Liu, L.
, Lund, M. S. & Su, G. (2017).
Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins.
Scientific Reports,
7(1), Artikel 8487.
https://doi.org/10.1038/s41598-017-09170-9
Rohde, P. D., Gartner, B., Ward, K.
, Sørensen, P. & F C Mackay, T. (2017).
Genomic Analysis of Genotype-by-Social Environment Interaction for Drosophila melanogaster Aggressive Behavior.
Genetics (Print),
206(4), 1969-1984.
https://doi.org/10.1534/genetics.117.200642
Gebreyesus, G., Lund, M. S., Janss, L., Bovenhuis, H.
, Poulsen, N. A. & Buitenhuis, A. J. (2017).
Genomic prediction for detailed milk protein composition traits. Poster session præsenteret på 5th Annual GenSAP Meeting, 15-16 November 2017, Billund, Danmark.
Ismael, A., Løvendahl, P., Fogh, A.
, Lund, M. S. & Su, G. (2017).
Improving genetic evaluation using a multitrait single-step genomic model for ability to resume cycling after calving, measured by activity tags in Holstein cows.
Journal of Dairy Science,
100(10), 8188-8196.
https://doi.org/10.3168/jds.2017-13122
Fang, L., Sahana, G., Su, G., Yu, Y., Zhang, S.
, Lund, M. S. & Sørensen, P. (2017).
Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle.
Scientific Reports,
7, Artikel 45560.
https://doi.org/10.1038/srep45560
Tesauro, C., Ferrando, B., Ma, X., Jepsen, M. L., Ivarsen, A. K., Frohlich, R., Stevnsner, T., Knudsen, B. R. & Ho, Y. P. (2017).
Isolation of functional mitochondria by inertial microfluidics - a new method to sort intracellular organelles from a small scale biological sample.
R S C Advances,
7(38), 23735-23741.
https://doi.org/10.1039/c7ra03384b
Shirali, M., Strathe, A. B., Mark, T.
, Nielsen, B. & Jensen, J. (2017).
Joint analysis of longitudinal feed intake and single recorded production traits in pigs using a novel Horizontal model.
Journal of Animal Science,
95(3), 1050-1062.
https://doi.org/10.2527/jas.2016.0606
Hjortø, L., Thomasen, J. R.
, Berg, P., Kargo, M., Henryon, M.
, Liu, H. & Sørensen, A. C. (2017).
Managing lethal alleles using genomic optimum contribution selection. Abstract fra EAAP, Tallin, Estland.
Garcia-Baccino, C. A., Legarra, A.
, Christensen, O. F., Misztal, I., Pocrnic, I., Vitezica, Z. G. & Cantet, R. J. C. (2017).
Metafounders are related to Fst fixation indices and reduce bias in single-step genomic evaluations.
Genetics Selection Evolution,
49(1), 1-14. Artikel 34.
https://doi.org/10.1186/s12711-017-0309-2Szalanski, M., Kristensen, T., Difford, G., Løvendahl, P. & Lassen, J. (2017).
Methane emission in Jersey cows during spring transition from in-door feeding to grazing. I
Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science (2017 udg., Bind 23, s. 148-148). Wageningen Academic Publishers.
https://doi.org/10.3920/978-90-8686-859-9
Wang, H.-M., Shi, L., Liang, T., Wang, B., Wu, W. J.
, Su, G., Wei, J., Li, P. & Huang, R. (2017).
MiR-696 regulates C2C12 cell proliferation and differentiation by targeting CNTFRα.
International Journal of Biological Sciences,
13(4), 413-425.
https://doi.org/10.7150/ijbs.17508Gebreyesus, G., Lund, M. S., Buitenhuis, A. J., Bovenhuis, H.
, Poulsen, N. A. & Janss, L. (2017).
Modeling heterogeneous (co)variances from adjacent-SNP groups improves genomic prediction for milk protein composition traits.
Genetics Selection Evolution,
49(1), Artikel 89.
https://doi.org/10.1186/s12711-017-0364-8
Chen, M.
, Alimadadi, H., Molin, S.
, Zhang, L., Ta, N., Hendriksen, P. V., Kiebach, R.
& Du, Y. (2017).
Modeling of Ni diffusion induced austenite formation in ferritic stainless steel interconnects.
Journal of The Electrochemical Society,
164(9), F1005.
Gebreyesus, G., Buitenhuis, A. J., Poulsen, N. A., Visker, M. H. P. W., Zhang, Q., van Valenberg, H. J. F., Sun, D. & Bovenhuis, H. (2017).
Multi-population GWAS for the de novo synthesis of milk fatty acids. Poster session præsenteret på 5th Annual GenSAP Meeting, 15-16 November 2017, Billund, Danmark.
Li, B., Berglund, B., Fikse, W. F.
, Lassen, J., Lidauer, M. H., Mäntysaari, P.
& Løvendahl, P. (2017).
Neglect of lactation stage leads to naive assessment of residual feed intake in dairy cattle.
Journal of Dairy Science,
100(11), 9076-9084.
https://doi.org/10.3168/jds.2017-12775
Poulsen, N. A., Gregersen, V. R., Maciel, G. D. M., Madsen, L. B., Buitenhuis, A. J., Stenholt Hansen, M.
, Bendixen, C. & Larsen, L. B. (2017).
Novel genetic variation associated to CSN3 strongly affects rennet-induced milk coagulation.
International Dairy Journal,
71, 122-130.
https://doi.org/10.1016/j.idairyj.2017.03.012
Cericola, F., Jahoor, A., Orabi, J., Andersen, J. R.
, Janss, L. L. & Jensen, J. (2017).
Optimizing Training Population Size and Genotyping Strategy for Genomic Prediction Using Association Study Results and Pedigree Information. A Case of Study in Advanced Wheat Breeding Lines.
P L o S One,
12(1), e0169606. Artikel e0169606.
https://doi.org/10.1371/journal.pone.0169606
Gregersen, V. R., Sørensen, E. S., S. Christiansen, B.
, Buitenhuis, A. J., Poulsen, N. A., Holm, L.-E., Stenholt Hansen, M.
, Larsen, L. B. & Thomsen, B. (2017).
Osteopontin and its relation to transcription of the major milk proteins. Abstract fra 14th International Symposium on Milk Genomics and Human Health, Québec City, Canada.
Gregersen, V. R., Sørensen, E. S., S. Christiansen, B.
, Buitenhuis, A. J., Poulsen, N. A., Holm, L.-E., Stenholt Hansen, M.
, Larsen, L. B. & Thomsen, B. (2017).
Osteopontin and its relation to transcription of the major milk proteins. Poster session præsenteret på 14th International Symposium on Milk Genomics and Human Health, Québec City, Canada.
Chen, M., Su, G., Fu, J.
, Zhang, Q., Wang, A.
, Sandø Lund, M. & Guldbrandtsen, B. (2017).
Population admixture in Chinese and European Sus scrofa.
Scientific Reports,
7(1), Artikel 13178.
https://doi.org/10.1038/s41598-017-13127-3
Chung, N. C., Szyda, J., Frąszczak, M., Fries, H. R.
, Lund, M. S., Guldbrandtsen, B., Boichard, D. A., Stothard, P., Veerkamp, R., Goddard, M., Van Tassell, C. P. & Hayes, B. (2017).
Population Structure Analysis of Bull Genomes of European and Western Ancestry.
Scientific Reports,
7, Artikel 40688.
https://doi.org/10.1038/srep40688Shetty, N., Difford, G., Lassen, J., Løvendahl, P. & Buitenhuis, A. J. (2017).
Predicting methane emissions of lactating Danish Holstein cows using Fourier transform mid-infrared spectroscopy of milk.
Journal of Dairy Science,
100(11), 9052-9060.
https://doi.org/10.3168/jds.2017-13014
Poulsen, N. A., Rosengaard, A. K., Szekeres, B. D., Gregersen, V. R., Jensen, H. B. & Larsen, L. B. (2017).
Protein heterogeneity of bovine β-casein in Danish dairy breeds and association of rare β-casein F with milk coagulation properties.
Acta Agriculturae Scandinavica, Section A - Animal Science,
66(4), 190-198.
https://doi.org/10.1080/09064702.2017.1342858
Younesi, N., Shariati, M., Zerehdaran, S., Noghabi, M. J.
& Løvendahl, P. (2017).
Quantile regression mixed model at different milk production levels of Iranian Holsteins. Abstract fra EAAP, Tallin, Estland.
Esfandyari, H., Henryon, M., Berg, P., Thomasen, J. R., Bjima, P.
& Sørensen, A. C. (2017).
Response to selection in finite locus models with non-additive effects.
Journal of Heredity,
108(3), 318-327.
https://doi.org/10.1093/jhered/esw123
Salleh, S. M., Mazzoni, G.
, Höglund, J. K., Olijhoek, D. W., Lund, P., Løvendahl, P. & Kadarmideen, H. N. (2017).
RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high- and low-residual feed intake in Nordic dairy cattle.
B M C Genomics,
18(1), Artikel 258.
https://doi.org/10.1186/s12864-017-3622-9Clasen, J. B.
, Lehmann, J. O., Thomasen, J. R.
, Østergaard, S. & Kargo, M. (2017).
Sexed semen counteracts the increase in the genetic lag in dairy herds managed for extended lactation. I
Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science (2017 udg., Bind 23, s. 255-255). Wageningen Academic Publishers.
https://doi.org/10.3920/978-90-8686-859-9Slagboom, M., Wallenbeck, A.
, Hjortø, L., Sørensen, A. C., Thomasen, J. R.
& Kargo, M. (2017).
Simulating consequences of choosing a breeding goal for organic dairy cattle production. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Welderufael, B. G., de Koning, D. J.
, Janss, L. L. G., Franzén, J. & Fikse, W. F. (2017).
Simultaneous genetic evaluation of simulated mastitis susceptibility and recovery ability using a bivariate threshold sire model.
Acta Agriculturae Scandinavica, Section A - Animal Science,
66(3), 125-134.
https://doi.org/10.1080/09064702.2016.1275761
Mebratie, W., Shirali, M., Madsen, P., Sapp, R. L., Hawken, R.
& Jensen, J. (2017).
The effect of selection and sex on genetic parameters of body weight at different ages in a commercial broiler chicken population.
Livestock Science,
204, 78-87.
https://doi.org/10.1016/j.livsci.2017.08.013
Miglior, F., Baes, C. B., Canovas, A., Coffey, M., Connor, E. E., De Pauw, M., Gredler, B., Goddard, E., Hailu, G.
, Lassen, J., Amer, P., Osborne, V., Pryce, J., Sargolzaei, M., Schenkel, F. S., Wall, E., Wang, Z., Wright, T. & Stothard, P. (2017).
The efficient dairy genome project: environmental stewardship through genomic selection. 376. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Cai, Z., Petersen, B.
, Sahana, G., Madsen, L. B., Larsen, K., Thomsen, B., Bendixen, C., Lund, M. S., Guldbrandtsen, B. & Panitz, F. (2017).
The first draft reference genome of the American mink (Neovison vison).
Scientific Reports,
7(1), Artikel 14564.
https://doi.org/10.1038/s41598-017-15169-z
Li, X., Lund, M. S., Janss, L., Wang, C.
, Ding, X., Zhang, Q. & Su, G. (2017).
The patterns of genomic variances and covariances across genome for milk production traits between Chinese and Nordic Holstein populations.
BMC Genetics,
18, Artikel 26.
https://doi.org/10.1186/s12863-017-0491-9
Fang, L., Sahana, G., Ma, P., Su, G., Yu, Y., Zhang, S.
, Lund, M. S. & Sørensen, P. (2017).
Use of biological priors enhances understanding of genetic architecture and genomic prediction of complex traits within and between dairy cattle breeds.
B M C Genomics,
18(1), 604. Artikel 604.
https://doi.org/10.1186/s12864-017-4004-z
Younesi, N., Shariati, M., Zerehdaran, S., Noghabi, M. J.
& Løvendahl, P. (2017).
Using nonlinear quantile regression to describe the milk somatic cell count of Iranian Holstein cows. 262. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Liu, A., Lund, M. S., Wang, Y.
, Guo, G., Dong, G.
, Madsen, P. & Su, G. (2017).
Variance components and correlations of female fertility traits in Chinese Holstein population.
Journal of Animal Science and Biotechnology,
8(1), Artikel 56.
https://doi.org/10.1186/s40104-017-0189-x
Karaman, E., Lund, M. S., Anche, M. T., Janss, L. & Su, G. (2017).
Weighted Multi-Trait GBLUP: Using (co)variance estimates from Bayesian models. Poster session præsenteret på 5th Annual GenSAP Meeting, 15-16 November 2017, Billund, Danmark.
Khatun, M., Jorgensen, H. B. H., Ehsani, A., Lund, M. S., Sahana, G., Sorensen, P. & Rontved, C. M. (2017).
Whole blood optimization and genetic association of ex vivo TNF-alpha responsiveness to killed E-coli in Danish Holstein cows.
Livestock Science,
201, 92-98.
https://doi.org/10.1016/j.livsci.2017.04.014
Guldbrandtsen, B., Mullaart, E., Fritz, S., De Roo, S., Aamand, G. P., David, X., Jimenez, J. A., Alkhoder, H., Liu, Z., Schrooten, C. & Zukowski, K. (2017).
Wide-spread adoption of customized genotyping improves European cattle breeding. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.
Sahana, G., Iso-Touru, T.
, Wu, X., Nielsen, U., de Koning, D.-J.
, Lund, M. S., Vilkki, J.
& Guldbrandtsen, B. (2016).
A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle.
Genetics Selection Evolution,
48(1), Artikel 35.
https://doi.org/10.1186/s12711-016-0215-z
Fè, D., Ashraf, B. H., Pedersen, M. G.
, Janss, L., Byrne, S., Roulund, N., Lenk, I., Didion, T.
, Asp, T., Jensen, C. S.
& Jensen, J. (2016).
Accuracy of genomic prediction in a commercial perennial ryegrass breeding program.
The Plant Genome,
9(3).
https://doi.org/10.3835/plantgenome2015.11.0110
Manzanares, C., Barth, S., Thorogood, D.
, Byrne, S., Yates, S.
, Czaban, A., Asp, T., Yang, B. & Studer, B. (2016).
A Gene Encoding a DUF247 Domain Protein Cosegregates with the S Self-Incompatibility Locus in Perennial Ryegrass.
Molecular Biology and Evolution,
33(4), 870-884.
https://doi.org/10.1093/molbev/msv335Rovere, G., Ducro, B. J., van Arendonk, J. A. M.
, Norberg, E. & Madsen, P. (2016).
Analysis of competition performance in dressage and show jumping of Dutch Warmblood horses.
Journal of Animal Breeding and Genetics,
133(6), 503-512.
https://doi.org/10.1111/jbg.12221
Xiang, T., Nielsen, B., Su, G., Legarra, A.
& Christensen, O. F. (2016).
Application of single-step genomic evaluation for crossbred performance in pig.
Journal of Animal Science,
94(3), 936-948.
https://doi.org/10.2527/jas.2015-9930
Rohde, P. D., Krag, K., Loeschcke, V., Overgaard, J., Sørensen, P. & Kristensen, T. N. (2016).
A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population.
International Journal of Genomics,
2016, 1-11. Artikel 2157494.
https://doi.org/10.1155/2016/2157494
Michot, P., Chahory, S.
, Marete, A. G., Grohs, C., Dagios, D., Donzel, E., Aboukadiri, A., Deloche, M.-C., Allais-Bonnet, A., Chambrial, M., Barbey, S., Genestout, L., Boussaha, M., Danchin-Burge, C., Fritz, S., Boichard, D. & Capitan, A. (2016).
A reverse genetic approach identifies an ancestral frameshift mutation in RP1 causing recessive progressive retinal degeneration in European cattle breeds.
Genetics Selection Evolution,
48.
https://doi.org/10.1186/s12711-016-0232-yØstergaard, S., Ettema, J. F., Hjortø, L., Pedersen, J.
, Lassen, J. & Kargo, M. (2016).
Avoiding double counting when deriving economic values through stochastic dairy herd simulation.
Livestock Science,
187, 114-124.
https://doi.org/10.1016/j.livsci.2016.03.004
Thodberg, K., Sørensen, L. U., Videbech, P. B.
, Haun Poulsen, P., Houbak, B., Damgaard, V., Keseler, I.
, Edwards, D. & Christensen, J. W. (2016).
Behavioral Responses of Nursing Home Residents to Visits From a Person with a Dog,a Robot Seal or a Toy Cat.
Anthrozoos,
29(1), 107-121.
https://doi.org/10.1080/08927936.2015.1089011
Thodberg, K., Sørensen, L. U., Videbech, P. B.
, Haun Poulsen, P., Houbak, B., Damgaard, V., Keseler, I.
, Edwards, D. & Christensen, J. W. (2016).
Behaviour of nursing home residents towards a visiting animal and the human companion - A randomized controlled trial in 4 Danish nursing homes. I M. B. Jensen, K. Thodberg & J. W. Christensen (red.),
Nordic ISAE 2016: Proceedings of the 26th Nordic Regional Symposium of the International Society for Applied Ethology (January 2016 udg., Bind DCA Report No. 070, s. 27-27).
http://web.agrsci.dk/djfpublikation/djfpdf/DCArapport070.pdf
Steffensen, S., Pedersen, H., Adhikari, K., Laursen, B., Jensen, C., Høyer, S., Borre, M., Pedersen, H. H.
, Borre, M., Edwards, D. & Fomsgaard, I. S. (2016).
Benzoxazinoids in Prostate Cancer Patients after a Rye-Intensive Diet: Methods and Initial Results.
Journal of Agricultural and Food Chemistry,
64(43), 8235-8245.
https://doi.org/10.1021/acs.jafc.6b03765
Wang, L., Madsen, P., Sapp, R., Henshall, J., Hawken, R.
, Alemu, S. W., Sørensen, A. C. & Jensen, J. (2016).
Bias due to selective genotyping in genomic prediction using H-BLUP. Poster session præsenteret på XXV World's Poultry Congress (WPC2016), Beijing, Kina.
Wang, L., Madsen, P., Sapp, R., Henshall, J., Hawken, R.
, Alemu, S. W., Sørensen, A. C. & Jensen, J. (2016).
Bias due to selective genotyping in genomic prediction using H-BLUP. Poster session præsenteret på 5th International Conference on Quantitative Genetics , Madison, USA.
Ulrich-Lynge, S. L., Juul-Madsen, H. R., Kjærup, R. B., Okimoto, R., Abrahamsen, M., Maurischat, S.
, Sørensen, P. & Dalgaard, T. S. (2016).
Broilers with low serum Mannose-binding Lectin show increased faecal shedding of Salmonella enterica serovar Montevideo.
Poultry Science,
95(8), 1779-1786.
https://doi.org/10.3382/ps/pew101
Zhu, Z., Noel, S. J., Difford, G., Al-Soud, W. A., Brejnrod, A. D., Sørensen, S. J.
, Lassen, J., Løvendahl, P. & Højberg, O. (2016).
Community structure of rumen metabolically active bacterial and archaeal communities in dairy cows over the transition period. Poster session præsenteret på INRA - Rowett 2016, Clermont-Ferrand, Frankrig.
Katam, R., Sakata, K.
, Suravajhala, P., Pechan, T., Kambiranda, D. M., Naik, K. S., Guo, B. & Basha, S. M. (2016).
Comparative leaf proteomics of drought-tolerant and -susceptible peanut in response to water stress.
Journal of Proteomics,
143, 209-226.
https://doi.org/10.1016/j.jprot.2016.05.031Zhang, Q., Guldbrandtsen, B., Calus, M. P. L.
, Lund, M. S. & Sahana, G. (2016).
Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships.
Genetics Selection Evolution,
48(1), Artikel 60.
https://doi.org/10.1186/s12711-016-0238-5
Rohde, P. D., Demontis, D., Castro Dias Cuyabano, B., Børglum, A. & Sørensen, P. (2016).
Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes.
Genetics (Print),
203(4), 1901-1913.
https://doi.org/10.1534/genetics.116.189498
