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Publications

Peer-reviewed publications at QGG

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Stephansen, R. B., Lassen, J., Ettema, J. & Kargo, M. (2018). The economic value of saved feed in dairy cattle breeding goals. In Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science: EAAP Book of Abstracts, Volume 24 (Vol. 24). Wageningen Academic Publishers. https://docs.eaap.org/2018/Session45/S45_08_Stephansen.pdf
de Koning, D.-J., Jaffrézic, F., Lund, M. S., Watson, M., Channing, C., Hulsegge, I., Pool, M., Buitenhuis, B., Hedegaard, J., Hornshøj, H., Jiang, L., Sørensen, P., Marot, G., Delmas, C., Lê Cao, K.-A., SanChristobal, M., Baron, M. D., Malinverni, R., Stella, A. ... Janss, L. (2007). The EADGENE Microarray Data Analysis Workshop. Genetics Selection Evolution, (39), 621-631. https://doi.org/10.1051/gse:2007028
Jaffrezic, F., Hedegaard, J., Sancristobal, M., Klopp, C. & de Koning, D.-J. (2009). The EADGENE and SABRE post-analyses workshop. BMC Proceedings, (4), I1. https://doi.org/10.1186/1753-6561-3-S4-I1
Hastings, N., Fernandez, A., Lund, M. S., Sahana, G., Thomsen, B., Schulman, N., Williams, J. L., Andersson-Eklund, L., Viinalass, H. & Vilkki, J. (2007). The discovery of QTL for mastitis resistance in Nordic dairy cattle. In Proceeding of 8th International Veterinary Immunology Symposium (pp. 53-54)
Taylor, C., Holm, P. B. & Boelt, B. (1999). The development of microsatellite markers in Lolium perenne. In M. Falcinelli & D. Rosellini (Eds.), Proceedings of the Fourth International Herbage Seed ConferenceHerbage seed as a key factor for improving production and environmental quality (pp. 208-209)
Christiansen, C., Jørgensen, A. S. & Hansen, H. (2003). The Danish varroa control strategy. In Proceedings of the Nordic-Baltic Apicultural Research Symposium, Bjerringbro, Denmark (pp. 4-5). Danmarks JordbrugsForskning.
Poulsen, N. A., Larsen, L. B., Bendixen, C., Lund, M. S., Bertram, H. C., Larsen, M. K., Jensen, H. B., Sundekilde, U., Buitenhuis, B., Krag, K., Pasgaard, H., Stålhammar, H., Lindmark-Månsson, H., Andrén, A. & Paulsson, M. (2009). The Danish/Swedish milk genomics initiative. Poster session presented at 6th International Symposium in Milk Genomics and Human Health, Paris, France.
Sorensen, D. (1997). The Danish Pig Breeding Programme: Current Status and Future Prospects. In Proc. International Symposium on Pig Production (Invited) (pp. 75-81)
Vigh-Larsen, F., Diernæs, F. L., Svarts, H. E., Vensild, H., Fræhr, E. & Petersen, P. H. (2001). The Danish Commitee for the Management of Farm Animal Genetic Resources. In Report on the activities 1997-2001 (May ed.)
Asp, T., Frei, U. K., Didion, T., Nielsen, K. K., Holm, P. B. & Lübberstedt, T. (2007). The DAFGRI genome project - completed. In Abstract Book (pp. 51)
Asp, T., Brinch-Pedersen, H., Didion, T., Frei, U. K., Gjetting, T., Hansen, M., Holm, K. B., Josefsen, L., Larsen, G. G., Lübberstedt, T., Skov, J., Sørensen, M. B., Vincze, É., Lyngkjær, M. F., Rasmussen, S. K., Nielsen, K. K., Holm, P. B., Andersen, C. H. & Thordal-Christensen, H. (2007). The DAFGRI genome project - completed. In Abstract Book (pp. 34)
Malinowska, M., Nagy, I., Wagemaker, C. A. M., Ruud, A. K., Svane, S. F., Thorup-Kristensen, K., Jensen, C. S., Eriksen, B., Krusell, L., Jahoor, A., Jensen, J., Eriksen, L. B. & Asp, T. (2020). The cytosine methylation landscape of spring barley revealed by a new reduced representation bisulfite sequencing pipeline, WellMeth. The Plant Genome, 13(3), e20049. Article e20049. https://doi.org/10.1002/tpg2.20049
Boelt, B. (2005). The concept of the the Danish working group on coexistence. In Conference proceeding (pp. 34-36)
Zhu, Z., Noel, S. J., Difford, G., Abu Al-Soud, W., Brejnrod, A., Sørensen, J., Lassen, J., Løvendahl, P. & Højberg, O. (2016). The community structure of rumen metabolically active bacterial and archaeal communities in dairy cows over the transition period. In Proceedings: Gut Microbiology - 20 Years & counting. 10th INRA-Rowett Symposium (pp. 92-92).
Andersen, S. B., Boelt, B., Tolstrup, K., Buus, M., Gylling, M., Holm, P. B., Kjellsson, G., Pedersen, S., Østergård, H. & Mikkelsen, S. A. (2003). The co-existence of genetically modified crops with conventional and organic crops. In Proceedings (pp. 231)
Härndahl, U., Buffoni Hall, R., Osteryoung, K., Bornman, J., Vierling, E. & Sundby, C. (1999). The chloroplast small heat shock protein undergoes oxidation-dependent conformational changes and may protect plants from oxidative stress. Cell Stress and Chaperones, (4), 129-138.
Hou, Y., Zou, D., Chu, Q., Zhan, B., Wang, R., Guan, D., Wang, W., Feng, X., Li, X., Zhu, X., Bai, Z., Gao, Y., Yin, H., Xu, T., Yuan, Z., Hu, X., Yang, N., Zhou, H., Fang, L. & Zhang, Z. (2026). The ChickenGTEx portal: a pan-tissue catalogue of regulatory variants shaping transcriptomic and phenotypic diversity. Nucleic Acids Research, 54(D1), D982-D993. https://doi.org/10.1093/nar/gkaf731
Larsen, M. & Madsen, P. (1999). The CEBUS project: History and overview. In Interbull Bulletin of the Computational Cattle Breeding 99 (Vol. 20, pp. 3-10)
Vajta, G. (2003). The attack of the Cloners. In Proceedings Abilgaard Symposium (pp. 63)
Schou, T. W., Labouriau, R., Permin, A., Christensen, J. P., Sørensen, P., Cu, H. P., Nguyen, V. K. & Juul-Madsen, H. R. (2008). The association of the MHC with disease resistance in experimental infections with salmonella enteritidis, pasteurella multocida or ascaridia galli. In Conference proceedings of the 10th Avian Immunology Research Group Conference
Poulsen, N. A., Bertelsen, H. P., Gustavsson, F., Jensen, H. B., Glantz, M., Andrén, A., Lindmark-Månssons, H., Bendixen, C., Paulsson, M., Buitenhuis, A. J. & Larsen, L. B. (2012). The association of non-, poor and good coagulating milk with genetic milk protein variants in three Scandinavian dairy breeds. In Proceedings from 9th International Symposium on Milk Genomics and Human Health (pp. 27)
Kristensen, A. R. & Jørgensen, E. (1995). The application of Markov decision processes as a framework for decision support in animal production. In Proceedings of FACTs 95, Farm Animal Computer Technologies Conference (pp. 136-145)
Korsgaard, I. R. & Andersen, A. H. (1998). The additive genetic model and frailty models for survival data. In Booklet of Abstracts of the 17th Nordic Conference On Mathematic Statistics (pp. 40)
Korsgaard, I. R. & Andersen, A. H. (1998). The Additive Genetic Gamma Frailty Model. Scandinavian Journal of Statistics, 255-269.
Korsgaard, I. R. & Andersen, A. H. (1995). The additive genetic gamma frailty model. In 21st European Meeting of Statisticians. University of Aarhus (pp. 193)
McLain, A., Kowalczyk, A., Baran-Rachwalska, P., Sutera, F. M., Robertson, L. J., Nielsen, N. S., Enghild, J. J., Cobice, D., Bonelli, F., Barbaro, V., Ferrari, S., Patterson, B., Moore, L., Marshall, J., Nesbit, M. A. & Moore, T. (2025). TGFBI R124H mutant allele silencing in granular corneal dystrophy type 2 using topical siRNA delivery. Journal of Controlled Release, 382, Article 113681. https://doi.org/10.1016/j.jconrel.2025.113681
Berg, P. & Sørensen, M. K. (2009). Test of methods of measuring efficiency of selection in dairy cattle breeding schemes, with examples from Danish Holstein Friesian. Poster session presented at Annual Meeting of of the European Association for Animal Production, EAAP, Barcelona, Spain.
Jakobsen, J. H. (2001). Test dags modeller og persistens (flad laktationskurve). Sortbroget Kvæg, SDM - Dansk Holstein, (1), 26.
Aamand, G. P., Pedersen, J. & Madsen, P. (1999). Testdagsmodeller i Danmark og andre lande. DRK-avleren, (3), 23-26.
Aamand, G. P., Pedersen, J. & Madsen, P. (1999). Testdagsmodeller i Danmark og andre lande. Sortbroget Kvæg, (4), 20-23.
Aamann, G. P. & Madsen, P. (1999). Testdagsmodeller i Danmark. RDM-NYT, (338), 24-25.
Thodberg, K., Jørgensen, E. & Pedersen, L. J. (2005). Test and re-test repeatability of an arena test in gilts and the connection to mixing. In Aktuelle Arbeiten zur artgemässen Tierhaltung, KTBL-Schrift 441 (pp. 101-102)
Caldwell, M. M., Ballaré, C. L., Bornman, J., Flint, S. D., Björn, L. O., Teramura, A. H., Kulandaivelu, G. & Tevini, M. (2003). Terrestrial ecosystems, increased solar ultraviolet radiation and interactions with other climatic change factors. Photochemical & Photobiological Sciences, 2(1), 29-38. https://doi.org/10.1039/b211159b
Kantanen, J., Olsaker, I., Sandberg, K., Adalsteinsson, S., Pirhonen, K. & Holm, L.-E. (1999). Temporal changes in genetic variation in North European cattle breeds. Animal Genetics, 30, 16-27.
Derks, M., Blavy, P., Höglund, J. & Friggens, N. (2016). Templates to classify progesterone profiles, built using real-time milk progesterone measurements. In C. Kamphuis & W. Steeneveld (Eds.), Precision Dairy Farming 2016 Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-829-2
Sørensen, J. G., Sarup, P., Kristensen, T. N. & Loeschcke, V. (2008). Temperature induced hormesis in Drosophila melanogaster. In E. Le Bourg & S. Rattan (Eds.), Mild stress and healthy aging: (pp. 65-79). Springer.
Labouriau, R. & Høyer, L. (1999). Temperature dependence of ethylene induced leaflet abscission in Radermachera sinica. Poster session presented at International Symposium on Postharvest Physiology of Ornamental Plants (ISHS), Ft. Lauderdale, Florida, United States.
Hjarvard, B. M., Mortensen, F. B. L., Larsen, O. N. & Kjær, J. B. (2000). Telemetric measurement of heartbeat sound during behavioural testing in laying hens. In Proc. Measuring Behaviour 2000 (pp. 19-20)
Ssemakula, F., Kabuye, A., Geoffrey, S., Akol, R., Mwikirize, C., Nkirote Kunyanga , C., Cheruiyot Bett , R., Nakimbugwe, D., Katumba, A. & Gebreyesus, G. (2024). Technological prediction of protein and fat in black soldier fly larvae. Abstract from Insects for the Green Economy: Sustainable Food
Systems and Livelihoods in Africa, Nairobi, Kenya. https://qgg.au.dk/fileadmin/site_files/mb/QGG/Billeder/FLYgene/book-of-abstracts-insects-for-the-green-economy-conference-feb2024.pdf
Nordbo, E., Christensen, S. & Kristensen, K. (1995). Technik für die kleinräumige Bestandesführung. In Kuratorium für Technik und Bauwesen in der Landwirtschaft e.V (Vol. 214, pp. 102-115)
Rasmussen, M. D., Foldager, L. & Hemling, T. C. (2002). Teat conditioning, udder health and frequency of milking: impact of teat dip composition. In Proc. Inaugural Symposium, DeLaval Hygiene Technology Center (pp. 16-22)
Sørensen, P., Jensen, J. & Christensen, L. G. (2002). Teaching University Level Animal Breeding and Genetics in Denmark. In J. Jensen (Ed.), Animal Breeding and Genetics in the 21st Century; Status and Visions for Future Research (pp. 231-234)
Bornman, J. (1989). Target sites of UV-B radiation in photosynthesis of higher plants. Journal of Photochemistry and Photobiology, B: Biology, 4, 145-158.
Zhang, Y., Ran, Y., Nagy, I., Lenk, I., Qiu, J. L., Asp, T., Jensen, C. S. & Gao, C. (2020). Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system. Plant Biotechnology Journal, 18(9), 1854-1856. https://doi.org/10.1111/pbi.13359
Zhao, P., Peng, C., Fang, L., Wang, Z. & Liu, G. E. (2023). Taming transposable elements in livestock and poultry: a review of their roles and applications. Genetics Selection Evolution, 55(1), Article 50. https://doi.org/10.1186/s12711-023-00821-2
Salleh, S. M., Höglund, J., Løvendahl, P. & Kadarmideen, H. N. (2015). Systems genetics and transcriptomics of feed efficiency in Nordic dairy cattle. In European Association for Animal Production. Annual Meeting. Book of Abstracts (pp. 158-158)
He, S., Song, B., Tang, Y., Qu, X., Li, X., Yang, X., Bao, Q., Fang, L., Jiang, J., Tang, Z. & Yi, G. (2025). Systematic benchmarking of tools for structural variation detection using short- and long-read sequencing data in pigs. iScience, 28(3), Article 111983. https://doi.org/10.1016/j.isci.2025.111983
Pei, Y., Zhao, X., Du, W., Diao, W., Zhang, W., Xiong, B., Ramstein, G. P., Ottosen, C. O., Cheng, C., Zhao, Q., Li, J., Lou, Q., Chen, J. & Yu, X. (2025). Synthetic allopolyploidy unveils hybridization-driven transcriptional reprogramming underlying thermal adaptation in Cucumis. Plant Journal, 124(1), Article e70507. https://doi.org/10.1111/tpj.70507
Nepogodiev, S. A., Field, R. A. & Damager, I. (2009). Synthesis of oligosaccharide fragments of pectic polysaccharides. In N. E. Nifantiev (Ed.), Progress in the synthesis of complex carbohydrate chains of plant an microbial polysaccharides (pp. 33-60). Research Publishers.
Marcussen, J., Rajagopal, R., Nielsen, B. & Ulvskov, P. (1988). Synthesis of a stable IAA-N1-protein antigen for monoclonal antibody production. In 13th International Conference on Plant Growth Substances: Abstract 269
Golovin, S., Malchenko, S. N. & Serov, O. (1992). Synthesis, cloning and nucleotide sequencing of active center of ATR American mink (Mustela vison). In Proceedings of the 5th Russian Conference: New Ways of Biology (pp. 43-44)
Soloy, E., Kanka, J., Callesen, H. & Greve, T. (1996). Synchronization of DNA synthesis in parthenogenetically activated bovine oocytes. Theriogenology, (45), 158.