Publications

Peer-reviewed publications at QGG

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Schou, J. A., Lund, L. & Sandermann, J. (1994). Spontan ventrikelruptur hos voksne. Ugeskrift for Læger, 156(22), 3299-302, 3305.

Jansen, N. A., Linnenbank, C., Schenke, M., Voskuyl, R. A., Jorge, M. S., Krivoshein, G., Breukel, C., Linssen, M. M., Claassens, J. W. C., Brouwers, C., van Heiningen, S. H., Heuck, A., Lykke-Hartmann, K., Tolner, E. A. & van den Maagdenberg, A. M. J. M. (2024). Spontaneous spreading depolarizations originate subcortically in a novel mouse model of familial hemiplegic migraine type 2. Neurobiology of Disease, 202, Article 106714. https://doi.org/10.1016/j.nbd.2024.106714

Højsgaard, S. (1998). Split Models for Contingency Tables. Aarhus Universitet, Det Jordbrugsvidenskabelige Fakultet.

Højsgaard, S. (2003). Split models for contingency tables. Computational Statistics & Data Analysis, 42(4), 621-645. https://doi.org/10.1016/S0167-9473(02)00119-6

Højsgaard, S. (1998). Splitmodeller og modelselektion. In Dina Notat 75 (pp. 19-19)

Badsberg, J. H., Nielsen, L. & Hansen, H. H. (2003). Spiser kvæg som en grønthøster, eller er de kræsne. In Bilag til Temamøde om Biometrianvendelse i planteforskningen (pp. 14-26)

Deleuran, L. C. & Boelt, B. (2006). Spinach seed production in Denmark. In Proc. 2006 International spinach conference (pp. 13-15). Washington State University.

Lomholt, A. (1998). Spildundersøgelser og høsttidsforsøg i alm. Dansk Frøavl, 6, 92.

Miller, G. A., Clissold, F. J., Mayntz, D. & Simpson, S. J. (2009). Speed over efficiency: locusts select body temperatures that favour growth rate over efficient nutrient utilization. Proceedings of the Royal Society B: Biological Sciences, 276(1673), 3581-3589. https://doi.org/10.1098/rspb.2009.1030

Juul-Madsen, H. R. & Henryon, M. (2004). Specifik og uspecifik immunitet - Avl for sygdomsresistens. In Bilag til temamøde "Kan sundheden i svineproduktionen forbedres gennem avl?" (pp. 3-7)

Jones, A. L., Johansen, I. E., Bean, S. J., Bach, I. & Maule, A. J. (1998). Specificity of resistance to pea seed-borne mosaic potyvirus in transgenic peas expressing the viral replicase (NIb) gene. Journal of General Virology, 79, 3129-3137.

Johansen, I. E., Rasmussen, O. F. & Heide, M. (1989). Specific identification of Clavibacter michiganense subsp. sepedonicum by DNA hybridization probes. Phytopathology, 79(10), 1019-1023.

Braunstein, T. H., Moury, B., Johannessen, M. & Albrechtsen, M. T. (2002). Specific degradation of 3' regions of GUS mRNA in posttranscriptionally silenced tobacco lines may be related to 5'-3' spreading of silencing. RNA, 8(8), 1034-1044.

Mao, I. L. (2000). Specielt SR-indeks for KFC-besætningen. Ny KvægForskning, 2(2), 4.

Andersen, B. B. (1995). Specialiseret produktion af højkvalitets oksekød. In Nordisk Lantbruk i det nya Europa (Vol. 2, pp. 168). Nordisk Jordbrugsforskning.

Pertoldi, C., Barker, S. F., Madsen, A. B., Jørgensen, H., Randi, E., Muñoz, J., Baagoe, H. J. & Loeschcke, V. (2008). Spatio-temporal population genetics of the Danish pine marten (Martes martes). Biological Journal of the Linnean Society, 93(3), 457-464. https://doi.org/10.1111/j.1095-8312.2007.00892.x

Kristensen, K., Simmelsgaard, S. E., Djurhuus, J. & Olesen, S. E. (1995). Spatial Variability of Soil Physical and Chemical Parameters. In S. E. Olesen (Ed.), SP Report (Vol. 26, pp. 39-55)

Kristensen, K. & Eriksen, J. (2000). Spatial variability of nitrogen in soil caused by excretion from outdoor pigs and influenced by distance to feeding area and huts. In IBS Nordic Regional Conference

Foldager, L. & Pedersen, J. (2002). Spatial distribution of detected single fish. Technical Report No. 2002-03

Debosz, K. & Kristensen, K. (1995). Spatial Covariability of N Mineralization and Textural Fractions in Two Agricultural Fields. Paper presented at Spatial Covariability of N Mineralization and Textural Fractions in Two Agricultural Fields.

Ostersen, T., Christensen, O. F., Madsen, P. & Henryon, M. (2016). Sparse single-step method for genomic evaluation in pigs. Genetics Selection Evolution, 48(1), Article 48. https://doi.org/10.1186/s12711-016-0227-8

Pedersen, G. A., Christensen, L. G. & Jensen, J. (1994). Spandindeks, et nyt redskab i kvægavlen? RDM-NYT, (318), 21-22.

Pedersen, G. A., Christensen, L. G. & Jensen, J. (1994). Spandindeks, et nyt redskab i kvægavlen? Jerseybladet, (10), 12-13.

Zumbach, B., Madsen, P. & Holm, B. (2009). Sow productivity and piglet survival in Norsvin Landrace. EAAP Book of Abstracts, 132. http://www.wageningenacademic.com/_clientfiles/EAAP/eaap2009-e.pdf

Damm, B. I., Moustsen, V., Jørgensen, E., Pedersen, L. J., Heiskanen, T. & Forkman, B. (2006). Sow Preferences for walls to lean against when lying down. Applied Animal Behaviour Science, 99(1-2), 53-63. https://doi.org/10.1016/j.applanim.2005.09.014

Damm, B. I., Heiskanen, T., Pedersen, L. J., Jørgensen, E. & Forkman, B. (2010). Sow preferences for farrowing under a cover with and without access to straw. Applied Animal Behaviour Science, 126(3-4), 97-104. https://doi.org/10.1016/j.applanim.2010.06.009

Forkman, B., Damm, B. I., Heiskanen, T., Pedersen, L. J. & Jørgensen, E. (2006). Sow preferences for farrowing under a cover wilth and without access to straw. In Joint East and West Central Europe ISAE regional meeting (pp. 41). Federal Agricultural Research Centre.

Welling, B., Hovmøller, M. S., Olsen, C. C. & Stølen, O. (1987). Sortsblandinger af vinterbyg 1986. Tidsskrift for Planteavl, 91, 369-374.

Olsen, C. C., Hovmøller, M. S., Henneberg, U., Stølen, O. & Welling, B. (1986). Sortsblandinger af vinterbyg 1983-85. Meddelelse - Statens Planteavlsforsøg, 1869.

Hovmøller, M. S., Henneberg, U., Olsen, C. C., Stølen, O. & Welling, B. (1986). Sortsblandinger af vinterbyg 1983-85. Tidsskrift for Planteavl, 90(1).

Welling, B., Hovmøller, M. S. & Olsen, C. C. (1984). Sortsblandinger af vårbyg 1983. Meddelelse - Statens Planteavlsforsøg, 1785.

Welling, B., Hovmøller, M. S. & Olsen, C. C. (1985). Sortsblandinger af vårbyg 1983: Meldugangreb og udbytteforhold. Tidsskrift for Planteavl, 89, 385-392.

Welling, B., Lønbæk, M., Olsen, C. C. & Hovmøller, M. S. (1983). Sortsblandinger af vårbyg. Tidsskrift for Planteavl, 87, 527-538.

Søndergaard, M., Liboriussen, L., Jeppesen, E., Pedersen, A. R., Skov, C., Skovgaard, H., Christensen, I., Bramm, M, M., Marsbøl, S. & Pedersen, L. (2007). Sørestaurering i Danmark. Vand og Jord, (4), 124-128.

Abreu, G. C. G., Pinheiro, A., Drummond, R. D., Camargo, S. R. & Menossi, M. (2010). Some statistical properties of gene expression clustering for array data. Advances and Applications in Statistics, 14(2), 191-204. http://pphmj.com/abstract/4607.htm

Vajta, G. (2007). Somatic cell nuclear transfer in its first and the second decade: sussesses, setbacks, paradoxes and perspectives. Reproductive BioMedicine Online, 15(5), 582-590. http://www.rbmonline.com/Article/3118

Vajta, G., Lewis, I. M., Hyttel, P., Thouas, G. A. & Trounson, A. O. (2001). Somatic cell cloning without micromanipulators. Cloning, 3, 89-95.

Christensen, O. F. (2009). Solved problems in geostatistics: by Leuangthong, O., Khan, K D, and Deutsch, C V. Biometrics, 65(3), 995-996. https://doi.org/10.1111/j.1541-0420.2009.01315_9.x

Geshi, N., Pauly, M. & Ulvskov, P. (2005). Solubilization of rhamnogalacturonan galactosyltransferase. Poster session presented at Gordon Research Conference, Plant Cell Walls, Meriden, United States.

Geshi, N., Pauly, M. & Ulvskov, P. (2002). Solubilization of galactosyltransferase that synthesizes 1,4-beta- galactan side chains in pecic rhamnogalacturonan I. Physiologia Plantarum, 114, 540-548.

Larsen, K. & Bendixen, C. (2004). Solanum tuberosum endonuclease mRNS, complete cds. GenBank Access. No. AY676603. Dataset

Larsen, K. (2002). Solanum tuberosum cultivar Kuras cinnamoyl CoA reductase mRNA, complete cds. Access. No. AY149608. Dataset

Larsen, K. (2002). Solanum tuberosum cultivar 68-DTU-28 hemoglobin mRNA, complete cds. Access No. AY151389. Dataset

Madsen, D. K., Larsen, K. & Madsen, M. H. (2002). Solanum sparsipilum starch-related protein gene, intron 1: GenBank AY177784. Dataset

Madsen, D. K., Larsen, K. & Madsen, M. H. (2003). Solanum sparsipilum starch-related protein gene, intron 1: GenBank Access. No. AY177784. Dataset

Jensen, C. R., Mogensen, V. O., Poulsen, H. H., Henson, I. E., Aagot, S., Hansen, E., Ali, M. & Wollenweber, B. (1998). Soil water matric potential and not soil water content determines drought responses in field-grown lupin (Lupinus angustifolius L). Functional Plant Biology, 25, 353-363.

Sibbesen, E., Skjøth, F. & Christensen, B. T. (1995). Soil and substance movement between plots in long-term field experiments. In B. T. Christensen & U. Trentemøller (Eds.), The Askov Long-Term Experiments on Animal Manure and Mineral Fertilizers: 100th Anniversary Workshop (pp. 136-153)

Hjarvard, B. M., Larsen, O. N., Juul-Madsen, H. R., Jørgensen, E. & Jensen, K. H. (2009). Social Rank Influences the Distribution of Blood Leukocyte Subsets in Female Growing pigs. Scandinavian Journal of Laboratory Animal Science, 36(4), 309-320.

Burow, E., Nielsen, T. R., Halekoh, U. & Knierim, U. (2009). Social interactions of dairy cows introduced postpartally to a separated barn section - pilot study. Acta Agriculturae Scandinavica, Section A - Animal Science, 59, 192-196. https://doi.org/10.1080/09064700903160710

Nielsen, H. M., Ask, B. & Madsen, P. (2018). Social genetic effects for growth in pigs differ between boars and gilts. Genetics Selection Evolution, 50(1), Article 4. https://doi.org/10.1186/s12711-018-0375-0

Nielsen, H.-M., Ask, B., Christensen, O. F., Janss, L., Heidaritabar, M. & Madsen, P. (2018). Social genetic effects for growth in Landrace pigs with varying group sizes. In Proceedings of the World Congress on Genetics Applied to Livestock Production, 11.212 http://www.wcgalp.org/system/files/proceedings/2018/social-genetic-effects-growth-landrace-pigs-varying-group-sizes.pdf

Kargo, M., Hjortø, L., Slagboom, M., Thomasen, J. R., Buitenhuis, A. J., Hein, L., Pedersen, J. & Munk, A. (2016). SOBcows - Specialized organic breeding goals and breeding schemes within dairy production. Paper presented at Nordic workshop in dairy cattle genetics and genomics, Copenhagen, Denmark. http://orgprints.org/30151/

Nielsen, G. C., Hansen, L. M. & Boelt, B. (2005). Snudebiller i hvidkløver til frø. Landscentret, Planteavl, Planteavlsorientering, (09-718). http://www.lr.dk/planteavl/informationsserier/planteavlsorientering/pl09-718.htm

Hansen, L. M. & Boelt, B. (2004). Snudebiller i hvidkløverfrø - kan det løses? In Planteproduktion 2004: Månedsmagasinet MARK, januar 2004 (pp. 68) http://www.lr.dk/planteavl/diverse/PLK04_4_8_L_M_Hansen.pdf

Panitz, F. (2004). SNPs for Genome Scan. Poster session presented at Conference of the International Society of Animal Genetics, ISAG, Tokyo, Japan. http://www.isag.org.uk/ISAG/all/ISAG_Tokyo_2004_Proceedings.pdf

Panitz, F., Stengaard, H., Hornshøj, H., Gorodkin, J., Hedegaard, J., Cirera, S., Thomsen, B., Madsen, L. B., Høj, A., Vingborg, R., Bujie, Z., Wang, X., Wang, X. F., Wernersson, R., Jørgensen, C. B., Scheibye-Knudsen, K., Arvin, T., Lumholdt, S., Sawera, M. ... Bendixen, C. (2007). SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation. Bioinformatics, 23(13), i387-i391. https://doi.org/10.1093/bioinformatics/btm192

Yousaf, M. F., Demirel, U., Naeem, M., Naawe, E. K. & Caliskan, M. E. (2024). SNP Markers Associated with Some Root, Stolon, and Tuber Traits in Tetraploid Potatoes (Solanum tuberosum L.) Grown Under Diverse Growing Systems. Potato Research, 67(4), 1735-1753. https://doi.org/10.1007/s11540-024-09718-z

Cai, Z., Villumsen, T. M., Asp, T., Guldbrandtsen, B., Sahana, G. & Lund, M. S. (2018). SNP markers associated with body size and pelt length in American mink (Neovison vison). BMC Genetics, 19(1), Article 103. https://doi.org/10.1186/s12863-018-0688-6

Hoj, A., Vingborg, R. K. K., Panitz, F., Bujie, Z., Gregersen, V. R. & Bendixen, C. (2006). SNP-mapping the porcine genome. In Book of abstracts: CD communication 21-16, 4 pp (pp. 193). WCGALP. http://www.wcgalp8.org.br/wcgalp8/articles/paper/21_762-1107.pdf

Panitz, F., Stengaard, H., Høj, A. & Bendixen, C. (2006). SNP discovery from porcine EST sequences - Assessment of medium quality prediction for genotyping applications. In Book of abstracts: CD communication 23-20, 3 pp (pp. 223). WCGALP. http://www.wcgalp8.org.br/wcgalp8/articles/paper/23_889-2043.pdf

Krag, K., Janss, L., Mahdi Shariati, M., Berg, P. & Buitenhuis, A. J. (2013). SNP based heritability estimation using a Bayesian approach. Animal, 7(4), 531-539. https://doi.org/10.1017/S1751731112002017

Speed, D., Kaphle, A. & Balding, D. J. (2022). SNP-based heritability and selection analyses: Improved models and new results. BioEssays, 44(5), e2100170. Article 2100170. https://doi.org/10.1002/bies.202100170

Do, D. N., Janss, L., Jensen, J. & Kadarmideen, H. N. (2015). SNP annotation-based whole genomic prediction and selection: an application to feed efficiency and its component traits in pigs. Journal of Animal Science, 93(5), 2056-2063. https://doi.org/10.2527/jas.2014-8640

Gislum, R. & Boelt, B. (2003). Snittet frøgræshalm på anden og tredje års afgrøde giver ikke nedgang i udbyttet. Agrologisk, 6, 8-9.

Clausen, D. & Boelt, B. (2002). Snitning af frøgræshalm i engrapgræs (Poa pratensis L) og almindelig rajgræs (Lolium perenne L.). In NJF-rapport 341 (pp. 22-29)

Boelt, B. (2002). Snitning af frøgræshalm - en mulig kvælstofressource. Agrologisk, 06, 18.

Vajta, G. (2005). Snart har vi klonede dyr i Danmark. LandbrugsAvisen, 6-7.

Deleuran, L. C. (2008). Smitte fra jord eller frø? Froeavleren, (8), 9.

Stefanucci, L., Moslemi, C., Tomé, A. R., Virtue, S., Bidault, G., Gleadall, N. S., Watson, L. P. E., Kwa, J. E., Burden, F., Farrow, S., Banasik, K., Bay, J., Boldsen, J. K., Brodersen, T., Brunak, S., Burgdorf, K., Chalmer, M. A., Didriksen, M., Dinh, K. M. ... Frontini, M. (2024). SMIM1 absence is associated with reduced energy expenditure and excess weight. Med, 5(9), 1083-1095.e6. https://doi.org/10.1016/j.medj.2024.05.015

Hedemann, M. S., Højsgaard, S. & Jensen, B. B. (2003). Small intestinal morphology and activity of intestinal peptidases in piglets around weaning. Journal of Animal Physiology and Animal Nutrition, 87, 32-41. https://doi.org/10.1046/j.1439-0396.2003.00405.x

Jensen, N. E., Jensen, J. & Møller, A. J. (1980). Slaughter quality in lambs of five breeds. Report No. 501

Larsen, A. E., Hansen, L. L., Hammershøj, M., Sørensen, P. & Hansen-Møller, J. (1995). Slagtekyllingers optagelse af lugt- og smagsstoffer fra svinegødning. SH Forskningsrapport No. 31

Nielsen, B. L., Thomsen, M. G. & Sørensen, P. (1999). Slagtekyllinger i det fri. Forskningsnytt om Oekologisk Landbruk i Norden, (4), 7-8.

Sørensen, P. & Kjær, J. B. (2000). Slagtekyllinger: Delrapport afgivet af Justitsministeriets arbejdsgruppe om slagtefjerkræ. Justitsministeriet.

Deleuran, L. C. (2001). Slæt som biprodukt i økologisk frøproduktion. Dansk Frøavl, (7), 124-125.

Boelt, B. (1998). Skududvikling og frøproduktion i engrapgræs, rød svingel og almindelig rajgræs. In NJF-rapport nr. 121. Seminar nr. 284 Frøavl (pp. 76-82)

Whitehead, C. C., Fleming, R. H., Julian, R. J. & Sørensen, P. (2003). Skeletal Problems Associated with Selection for Increased Production. In Poultry Breeding and Biotechnology (pp. 29-52). CABI Publishing.

Sorensen, D. & Pedersen, B. (1994). Skatoltallets arvelighed. Landsudvalget for Svin.

Deleuran, L. C. & Sørensen, H. H. (1999). Skårlægningsforsøg anno 1998. Dansk Frøavl, (1), 4-5.

Deleuran, L. C. & Sørensen, H. H. (2001). Skårlægning af engrapgræs. Grøn Viden - Markbrug, (236).

Sahana, G. & Pedersen, L. D. (2014). Skadelig mutation nedsætter frughtbarheden hos de røde racer. Ny KvægForskning, 2, 2-3.

Hansen, M. (2001). Size of calves in red Danish dairy cattle. In Mixed models applied in agricultural sciences based on a course in mixed models for use in animal health and animal welfare research (pp. 34-42)

Vogelmann, T. C., Bornman, C. & Bornman, J. (1983). Size fractionation of plant protoplasts by centrifugal elutriation. Experientia, (45), 264-265.

Baghooee, M. & Geissmann, Q. (2024). Size-aware deep-learning model for image-based insect classification. 68. Abstract from AI and Biology, Heidelberg, Germany.

Larsen, F. H., Chrestensen, I. B., Damager, I., Diaz, J., Engelsen, S. B. & Ulvskov, P. (2009). Site specific hydration of main cell wall potato pectin identified by solid-state ¹³C single-puls MAS and CP/MAS NMR spectroscopy. Poster session presented at Rocky Mountain Conference on Analytical Chemistry, Snowmass, Colorado, United States.

Jørgensen, J. R. (2007). Site-Specific harvest of cereals with quality graduation: an interdisciplinary approach.

Jørgensen, J. R. (2003). Site specific assessment of crop quality: Implementation of precision farming in practical agriculture. In DIAS Report (Vol. 100, pp. 113-118). Aarhus Universitet, Det Jordbrugsvidenskabelige Fakultet.

Albrechtsen, M., Dinesen, M., Madsen, C. T., Bruun-Rasmussen, M., Hansen, M., Lund, O. S., Constantin, G. D., Krath, B. N. & Johansen, E. (2004). siRNAs and miRNAs. In Proc. Keystone Symposium (pp. 379)

Jensen, J., Hohenboken, W. D., Madsen, P. & Andersen, B. B. (1995). Sire x nutrition interactions and genetic parameters for energy intake, production and efficiency of nutrient utilization in young bulls, heifers and lactating cows. Acta Agriculturae Scandinavica, Section A - Animal Science, 45, 81-91.

Jensen, J. (1986). Sire evaluation for type traits with linear and non-linear procedures. Livestock Science, 15, 165-171.

Jensen, J. (1985). Sire evaluation for ordered categorcal data with liniar and non-linear procedures. In Proceedings of the 36th Annual Meeting EAAP

Jensen, J., Madsen, P. & Andersen, B. B. (1991). Sire by rearing intensity interactions on feed intake, efficiency and production of bulls, heifers and cows. In Proceedings of the 42nd Annual Meeting EAAP (I) (pp. 41)

Christensen, O. F., Madsen, P., Nielsen, B., Ostersen, T. & Su, G. (2012). Single-step methods for genomic evaluation in pigs. Animal, 6(10), 1565-1571. https://doi.org/10.1017/S1751731112000742

Kempe, R. M., Koivula, M., Pitkänen, T. J., Stephansen, R. B., Pösö, J., Nielsen, U. S., Fikse, W. F., Aamand, G. P. & Lidauer, M. H. (2024). Single-step genomic prediction models for metabolic body weight in Nordic Holstein, Red dairy cattle, and Jersey. In Proceedings of the 2024 Interbull Meeting (pp. 92-96). Swedish University of Agricultural Sciences. https://journal.interbull.org/index.php/ib/article/view/1935

Kempe, R. M., Mehtiö, T., Leino, A.-M., Koivula, M., Pitkänen, T. J., Stephansen, R. B., Mäntysaari, P., Negussie, E., Pösö, J., Nielsen, U. S., Fikse, W. F., Aamand, G. P. & Lidauer, M. H. (2022). Single-step genomic prediction for metabolic body weight of Nordic Red dairy cattle. In WCGALP 2022: Programme book Wageningen Academic Publishers. https://www.wageningenacademic.com/pb-assets/wagen/WCGALP2022/14_005.pdf

Ma, P., Lund, M. S., Nielsen, U. S., Aamand, G. P. & Su, G. (2015). Single-step genomic model improved reliability and reduced the bias of genomic predictions in Danish Jersey. Journal of Dairy Science, 98(12), 9026-9034. https://doi.org/10.3168/jds.2015-9703

Fu, C., Ostersen, T., Christensen, O. F. & Xiang, T. (2021). Single-step genomic evaluation with metafounders for feed conversion ratio and average daily gain in Danish Landrace and Yorkshire pigs. Genetics Selection Evolution, 53(1), 79. Article 79. https://doi.org/10.1186/s12711-021-00670-x

Legarra, A., Christensen, O. F., Aguilar, I. & Misztal, I. (2014). Single Step, a general approach for genomic selection. Livestock Science, 166, 54-65. https://doi.org/10.1016/j.livsci.2014.04.029

Hua, J., Xing, Y., Wu, W., Xu, C., Sun, X., Yu, S. & Zhang, Q. (2003). Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in rice. Proceedings of the National Academy of Sciences (PNAS), 100(5), 2574-2579. https://doi.org/10.1073/pnas.0437907100

Yohalem, D. S., Paaske, K., Kristensen, K. & Larsen, J. (2007). Single application prophylaxis against gray mold in pot rose and pelargonium with Ulocladium atrum. Biological Control, 41(1), 94-98. https://doi.org/10.1016/j.biocontrol.2007.01.007

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