Publications

Peer-reviewed publications at QGG

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Nielsen, B., Madsen, P. & Henryon, M. (2012). Selection for number of live piglets at five-days of age increased litter size and reduced mortality. In Book of Abstracts (2012 ed., Vol. 18, pp. 335). Wageningen Academic Publishers.

Thirstrup, J. P., Anistoroaei, R. M., Guldbrandtsen, B., Kristensen, K. & Fredholm, M. (2012). Identifying QTL for fur quality traits in mink (Neovison vison). In P. F. Larsen, S. H. Møller, T. Clausen, A. S. Hammer, T. M. Lássen, V. H. Nielsen, A.-H. Tauson, L. L. Jeppesen, S. W. Hansen, J. Elnif & J. Malmkvist (Eds.), Proceeding of the X^th International Scientific Congress in fur animal production (3/4 ed., Vol. 36, pp. 216-222). Wageningen Academic Publishers. https://doi.org/10.3921/978-90-8686-760-8

Møller, S. H., Nielsen, V. H., Hansen, S. W. & Malmkvist, J. (Eds.) (2012). Proceeding of the X^th International Scientific Congress in fur animal production. (3/4 ed.) Wageningen Academic Publishers. https://doi.org/10.3921/978-90-8686-760-8

Höglund, J. K., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2012). Analyzes of genome-wide association follow-up study for calving traits in dairy cattle. BMC Genetics, 13(71), 1-9. https://doi.org/10.1186/1471-2156-13-71

Sørensen, P., Labouriau, R. & Steenfeldt, S. (2012). Allometric growth of intestine in fast and moderat growing broilers. Abstract from 72. World's Poultry Science, Salvador, Brazil.

Elkjær, K., Callesen, H. & Labouriau, R. (2012). Børbetændelse påvirker reproduktionen markant. Ny KvægForskning, 10(4), 4-5.

Thorup, V. M., Højsgaard, S., Weisbjerg, M. R. & Friggens, N. C. (2012). Real-time individual dairy cow energy balance estimated from body reserve changes. In Book of Abstracts of the 63rd Annual Meeting of the European Federation of Animal Science (Vol. 18, pp. 201-201). Wageningen Academic Publishers.

Andersen, J. P., Norup, L. R., Dalgaard, T. S., Kaiser, P., Permin, A., Schou, T. W., Fink, D. R., Jungersen, G., Sørensen, P. & Juul-Madsen, H. R. (2012). The effect of A.galli infection on vaccine-induced immunity to NDV in chickens. In AIRG 2012: Scientific Programme & Abstracts (pp. 111-111).

Kronbak, R., Ingvardsen, C. R., Walter, S., Hovmøller, M. S., Holm, P. B., Brinch-Pedersen, H. & Gregersen, P. L. (2012). R gene specificity in bread wheat. In ABSTRACTS (pp. 163-164)

Kronbak, R., Ingvardsen, C. R., Walter, S., Hovmøller, M. S., Holm, P. B., Brinch-Pedersen, H. & Gregersen, P. L. (2012). R gene specificity in bread wheat. Poster session presented at XV International Congress of Molecular Plant-Microbe Interactions, Kyoto, Japan.

Sørensen, A. C., (2012). Vurdering af ansøgning om officiel anerkendelse af Dansk Connemara Pony Selskab som avlsforbund, No. 824278, 1 p., Jul 17, 2012.

Thirstrup, J. P., Guldbrandtsen, B., Labouriau, R., Anistoroaei, R. M., Kristensen, K., Fredholm, M. & Nielsen, V. H. (2012). Evidence for similar location of QTL for guard hair length and thicknes in mink (Neovison vison). In Programme and Abstract Book (pp. 115-116).

Thirstrup, J. P., Guldbrandtsen, B., Labouriau, R., Anistoroae, R. M., Christensen, K., Fredholm, M. & Nielsen, V. H. (2012). Evidence for similar location of QTL for guard hair length and thickness in mink (Neovison vison). Poster session presented at 33rd International Society of Animal Genetics, Cairns, Australia.

Gao, H., Christensen, O. F., Madsen, P., Nielsen, U. S., Zhang, Y., Lund, M. S. & Su, G. (2012). Comparison on genomic predictions using GBLUP models and two single-step blending methods with different relationship matrices in the Nordic Holstein population. Genetics Selection Evolution, 44(8), 1-8. https://doi.org/10.1186/1297-9686-44-8

Sørensen, L. P., Janss, L., Madsen, P., Mark, T. & Lund, M. S. (2012). Estimation of (co)variances for genomic regions of flexible sizes: application to complex infectious udder diseases in dairy cattle. Genetics Selection Evolution, 44(18), 1-15. https://doi.org/10.1186/1297-9686-44-18

Nyord, T., Hansen, M. J., Grøn Sørensen, C., Jensen, A. L., Poulsen, H. D., Lund, P., Jensen, P. K., Melander, B., Børgesen, C. D., Thomsen, I. K., Hansen, E. M., Kjærgaard, C., Sørensen, P., Olesen, J. E., Holm, P. B. & Lund, M. S., (2012). Notat om status for anvendelsen af og udvikling af miljøteknologier på primære jordbrugsbedrifter, No. 822352, 25 p., Jul 02, 2012.

Brandt, P., Rousing, T., Herskin, M. S., Edwards, D. & Aaslyng, M. D. (2012). Measuring welfare of finishing pigs from loading at the procuder until sticking at a commercial abattoir. Abstract from ISAE, Wien, Austria.

Sorensen, D. & Janss, L. (2012). A computationally efficient Bayesian model for incorporating a vast number of markers. In Programme & Book of Abstracts, ICQG2012 (pp. 66-67).

Su, G., Christensen, O. F., Ostersen, T., Henryon, M. & Lund, M. S. (2012). Additive and non-additive genetic variances and genomic prediction. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Su, G., Christensen, O. F., Ostersen, T., Henryon, M. & Lund, M. S. (2012). Additive and non-additive genetic variances and genomic prediction. In Programme & Book of Abstracts, ICQG2012 (pp. 146-146).

Brøndum, R. F., Su, G., Lund, M. S., Bowman, P. K., Goddard, M. E. & Hayes, B. J. (2012). BayesRS: Genome Location Specific Priors To Improve Genomic Prediction. In Programme & Book of Abstracts, ICQG2012 (pp. 141-141).

Brøndum, R. F., Su, G., Lund, M. S., Bowman, P. K., Goddard, M. E. & Hayes, B. J. (2012). BayesRS Genome: Genome Location Specific Priors To Improve Genomic Prediction. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Liu, H., Berg, P., Sørensen, A. C. & Norberg, E. (2012). Changes in allele frequency. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Liu, H., Berg, P., Sørensen, A. C. & Norberg, E. (2012). Changes in allele frequency. In Programme & Book of Abstracts, ICQG2012 (pp. 158-159).

Bouquet, A., Pedersen, L. D., Henryon, M., Sørensen, A. C. & Juga, J. (2012). Comparing Predictions of Response to Genomic Selection using Selection Index Theory and Genotype Simulations. In Programme & Book of Abstracts, ICQG2012 (pp. 137-137).

Bouquet, A., Pedersen, L. D., Henryon, M., Sørensen, A. C. & Juga, J. (2012). Comparing Predictions of Response to Genomic Selection using Selection Index Theory and Genotype Simulations. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Kadri, N. K., Guldbrandtsen, B., Sørensen, P. & Sahana, G. (2012). Comparison of Association Mapping Methods in Admixed Populations. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Kadri, N. K., Guldbrandtsen, B., Sørensen, P. & Sahana, G. (2012). Comparison of Association Mapping Methods in Admixture Population. In Programme & Book of Abstracts of ICQG 2012 (pp. 232-232).

Ma, P., Brøndum, R. F., Zhang, Q., Lund, M. S. & Su, G. (2012). Comparison of methods to impute missing SNP markers in Swedish and Finnish Red Dairy Cattle population. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Ma, P., Brøndum, R. F., Zhang, Q., Lund, M. S. & Su, G. (2012). Comparison of methods to impute missing SNP markers in Swedish and Finnish Red Dairy Cattle population. In Programme & Book of Abstracts (pp. 144-144). ICQG.

Alemu, S. W., Berg, P. & Bjima, P. (2012). Estimating indirect genetic effect when interactions differ between kin and no kin. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Alemu, S. W., Berg, P. & Bjima, P. (2012). Estimating indirect genetic effect when interactions differ between kin and no kin. In Programme & Book of Abstracts, ICQG2012 (pp. 161-161).

Edriss, V., Fernando, R. L., Su, G., Lund, M. S. & Guldbrandtsen, B. (2012). Genealogy Haplotypes in Genomic Prediction. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Edriss, V., Fernando, R. L., Su, G., Lund, M. S. & Guldbrandtsen, B. (2012). Genealogy Haplotypes in Genomic Prediction. In Programme & Book of Abstracts, ICQG2012 (pp. 153-153).

Jiang, L., Janss, L., Høj-Edwards, S. M., Skarman, A., Thomsen, B. & Sørensen, P. (2012). Gene prioritization by data integration. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Jiang, L., Janss, L., Høj-Edwards, S. M., Skarman, A., Thomsen, B. & Sørensen, P. (2012). Gene prioritization by data integration. In Programme & Book of Abstracts, ICQG2012 (pp. 87-88).

Maia, R. P., Labouriau, R., Madsen, P. & Nielsen, B. (2012). Genetic Analysis of Sow Longevity. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Sahana, G., Guldbrandtsen, B. & Lund, M. S. (2012). Genetic architecture of clinical mastitis traits in dairy cattle. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Sahana, G., Guldbrandtsen, B. & Lund, M. S. (2012). Genetic Architecture of clinical mastitis traits in dairy cattle. In Programme & Book of Abstracts of ICQG 2012 (pp. 224-224).

Widyas, N., Nielsen, V. H. & Jensen, J. (2012). Genetic variance due to founder population and de novo matuations in a selection experiment for body weight in mice. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Widyas, N., Nielsen, V. H. & Jensen, J. (2012). Genetic variance due to founder population and de novo matuations in a selection experiment for body weight in mice. In Programme & Book of Abstracts, ICQG2012 (pp. 230-230).

Wang, L., Ostersen, T. & Edwards, D. (2012). Genome-wide linkage disequilibrium maps in three Danish commercial pig breeds and comparison of LD across breeds. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Wang, L., Ostersen, T. & Edwards, D. (2012). Genome-wide linkage disequilibrium maps in three Danish commercial pig breeds and comparison of LD across breeds. In Programme & Book of Abstracts, ICQG2012 (pp. 255-255).

Zhou, L., Ding, X., Zhang, Q., Wang, Y., Lund, M. S. & Su, G. (2012). Genomic prediction using the combined Chinese and Nordic Holsteins reference population. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Zhou, L., Ding, X., Zhang, Q., Wang, Y., Lund, M. S. & Su, G. (2012). Genomic prediction using the combined Chinese and Nordic Holsteins reference population. In Programme & Book of Abstracts, ICQG2012 (pp. 150-150).

Castro Dias Cuyabano, B., Su, G. & Lund, M. S. (2012). Haplotype Blocks Built from High Density Marker Map for Genomic Prediciton. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Castro Dias Cuyabano, B., Su, G. & Lund, M. S. (2012). Haplotype Blocks Built from High Density Marker Map for Genomic Prediciton. In Programme & Book of Abstracts, ICQG2012 (pp. 149-149).

Janss, L., de los Campos, G., Sheehan, N. & Sorensen, D. (2012). Inferences from Genomic Models in Structured Populations. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Schulman, N., Sahana, G., Tapio, M., Lund, M. S. & Vilkki, J. (2012). Mapping of milk traits in the combined Nordic Red Dairy cattle population by genome-wide association. In Programme & Book of Abstracts ICQG 2012 (pp. 226-226).

Schulman, N., Sahana, G., Tapio, M., Lund, M. S. & Vilkki, J. (2012). Mapping of milk traits in the combined Nordic Red Dairy cattle population by genome-wide association. Poster session presented at 4t International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Ehsani, A. R., Janss, L., Pomp, D. & Sørensen, P. (2012). Omic Partitioning of Complex Traits: by Variance Components Analysis Using Bayesian Variable Selection Models. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

Ehsani, A. R., Janss, L., Pomp, D. & Sørensen, P. (2012). Omic Partitioning of Complex Traits: by Variance Components Analysis Using Bayesian Variable Selection Models. In Programme & Book of Abstracts ICQG2012 (pp. 198-198).

Hayes, B., Anderson, C., Daetwyler, H., Fries, R., Guldbrandtsen, B., Lund, M. S., Boichard, D., Stothard, P., Veerkamp, R., Hulsegge, I., Rocha, D., Van Tassell, C. & The 1000 Bull Genomes Consortium (2012). Towards Genomic Prediction from Genome Sequence Data and the 1000 Bull Genomic Project. In Programme & Book of Abstracts of ICQG 2012 (pp. 55-55).

Høj-Edwards, S. M., Jiang, L., Madsen, P. & Sørensen, P. (2012). Using Kegg Pathways and Expression Studies and Stuff for Genomic Partitioning. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

de los Campos, G., Vazquez, A. I., Klementidis, Y. & Sorensen, D. (2012). Whole-Genome Regression and Prediction of Human Complex Traits using Data from Related and Unrelated Individuals. In Programme & Book of Abstracts, ICQG2012 (pp. 40-40).

Jørgensen, H. B. H., Buitenhuis, B., Røntved, C. M., Jiang, L., Ingvartsen, K. L. & Sørensen, P. (2012). Transcriptional profiling of the bovine hepatic response to experimentally induced E. coli mastitis. Physiological Genomics, 44(11), 595-606. https://doi.org/10.1152/physiolgenomics.00084.2011

Ketola, T., Kellermann, V., Kristensen, T. N. & Loeschcke, V. (2012). Constant, cycling, hot and cold thermal environments: strong effects on mean viability but not on genetic estimates. Journal of Evolutionary Biology, 25(6), 1209-12015. https://doi.org/10.1111/j.1420-9101.2012.02513.x

Bubliy, O. A., Kristensen, T. N., Kellermann, V. & Loeschcke, V. (2012). Humidity affects genetic architecture of heat resistance in Drosophila melanogaster. Journal of Evolutionary Biology, 25(6), 1180-1188. https://doi.org/10.1111/j.1420-9101.2012.02506.x

Schönherz, A., Lorenzen, N. & Einer-Jensen, K. (2012). Inter-Species Transmission of viral haemorrhagic septicaemia virus between marine and freshwater fishes. Poster session presented at SMBE 2012, Dublin, Ireland.

Schönherz, A., Lorenzen, N. & Einer-Jensen, K. (2012). Inter-species transmission of viral haemorrhagic septicaemia virus between turbot (Scophthalmus maximus) and rainbow trout (Onchorhynchus mykiss). Abstract from MBG Annual Meeting 2012, Aarhus, Denmark.

Garcia-Gamez, E., Sahana, G., Gutierrez-Gil, B. & Arranz, J.-J. (2012). Linkage disequilibrium and inbreeding estimation in Spanish Churra sheep. BMC Genetics, 13(43), 1-11. https://doi.org/10.1186/1471-2156-13-43

Schönherz, A. A., Hansen, M. H. H., Jørgensen, H. B. H., Berg, P., Lorenzen, N. & Einer-Jensen, K. (2012). Oral transmission as a route of infection for viral haemorrhagic septicaemia virus in rainbow trout, Oncorhynchus mykiss (Walbaum). Journal of Fish Diseases, 35(6), 395-406. https://doi.org/10.1111/j.1365-2761.2012.01358.x

Jensen, J., Su, G. & Madsen, P. (2012). Partitioning additive genetic variance into genomic and remaining polygenic components for complex traits in dairy cattle. BMC Genetics, 13(44). https://doi.org/10.1186/1471-2156-13-44

Yang, Y., Schön, C.-C. & Sorensen, D. (2012). The genetics of environmental variation of dry matter grain yield in maize. Genetics Research, 94(3), 113-119. https://doi.org/10.1017/S0016672312000304

Buch, L. H., Kargo, M., Berg, P., Lassen, J. & Sørensen, A. C. (2012). The value of cows in reference populations for genomic selection of new functional traits. Animal, 6(06), 880-886. https://doi.org/10.1017/S1751731111002205

Kapell, D. NRG., Sorensen, D., Su, G., Janss, L., Ashworth, C. J. & Roehe, R. (2012). Efficiency of genomic selection using Bayesian multimarker models for traits selected to reflect a wide range of heritabilities and frequencies of detected quantitative traits loci in mice. BMC Genetics, 13(42). https://doi.org/10.1186/1471-2156-13-42

Mahdi Shariati, M., Sørensen, P. & Janss, L. (2012). A two step Bayesian approach for genomic prediction of breeding values. BMC Proceedings, 6((Suppl 2):S12 ). https://doi.org/10.1186/1753-6561-6-S2-S12

Dashab, G. R., Kadri, N. K., Mahdi Shariati, M. & Sahana, G. (2012). Comparison of linear mixed model analysis and genealogy-based haplotype clustering with a Bayesian approach for association mapping in a pedigreed population. BMC Proceedings, 6(Suppl 2:S4). https://doi.org/10.1186/1753-6561-6-S2-S4

Skarman, A., Mahdi Shariati, M., Janss, L., Jiang, L. & Sørensen, P. (2012). A Bayesian variable selection procedure for ranking overlapping gene sets. BMC Bioinformatics, 13(73), 1-9. https://doi.org/10.1186/1471-2105-13-73

Højsgaard, S., Edwards, D. & Lauritzen, S. (2012). Graphical Models with R. Springer Science+Business Media. Use R! https://doi.org/10.1007/978-1-4614-2299-0

Ketola, T., Kristensen, T. N., Kellermann, V. M. & Loeschcke, V. (2012). Can evolution of sexual dimorphism be triggered by developmental temperatures? Journal of Evolutionary Biology, 25(5), 847-855. https://doi.org/10.1111/j.1420-9101.2012.02475.x

Sørensen, P. (2012). Genetics of Poultry Meat Production in Organic Systems. In S. C. Ricke, E. J. Van Loo, M. G. Johnson & C. A. O'Bryan (Eds.), Organic Meat Production and Processing (1 ed., pp. 137-145). Wiley-Blackwell.

Reed, D. H., Fox, C. W., Enders, L. S. & Kristensen, T. N. (2012). Inbreeding-stress interactions: evolutionary and conservation consequences. New York Academy of Sciences. Annals, 1256(1), 33-48. https://doi.org/10.1111/j.1749-6632.2012.06548.x

Pitkänen, T., Mäntysaari, E. A., Nielsen, U. S., Aamand, G. P., Madsen, P. & Lidauer, M. H. (2012). Measurement Error Variance of Test-Day Obervations from Automatic Milking Systems. In INTERBULL BULLETIN (Vol. 46, pp. 103-108)

Thomasen, J. R., Guldbrandtsen, B., Su, G., Brøndum, R. F. & Lund, M. S. (2012). Reliabilities of genomic estimated breeding values in Danish Jersey. Animal, 6(5), 789-796. https://doi.org/10.1017/S1751731111002035

Gao, H., Sandermann, J., Prag, J., Lund, L. & Lindholt, J. S. (2012). Rifampicin-soaked silver polyester versus expanded polytetrafluoro-ethylene grafts for in situ replacement of infected grafts in a porcine randomised controlled trial. European journal of vascular and endovascular surgery : the official journal of the European Society for Vascular Surgery, 43(5), 582-7. https://doi.org/10.1016/j.ejvs.2012.02.011

Madsen, P., Pösa, J., Pedersen, J., Lidauer, M. & Jensen, J. (2012). Screening for Outliers in Multiple Trait Genetic Evaluarion. In INTERBULL BULLETIN (Vol. 46, pp. 85-91)

Guo, X., Liu, X., Xu, X., Wu, M., Zhang, X., Li, Q., Liu, W., Zhang, Y., Wang, Y. & Yu, Y. (2012). The expression levels of DNMT3a/3b and their relationship with meat quality in beef cattle. Molecular Biology Reports, 39(5), 5473-9. https://doi.org/10.1007/s11033-011-1349-2

Sandøe, P., Rutherford, K. M. D. & Berg, P. (2012). Large litter sizes – ethical challenges and ways of dealing with them in future breeding and management. In Programme and Abstract book (pp. 74-76). Europe Association of Porcine Management.

Berbel, A., Ferrándiz, C., Hecht, V., Dalmais, M., Lund, O. S., Sussmilch, F. C., Taylor, S. A., Bendahmane, A., Ellis, T. H. N., Beltrán, J. P., Weller, J. L. & Madueño, F. (2012). VEGETATIVE1 is essential for development of the compound inflorescence in pea. Nature Communications, 3(797), 1-8. https://doi.org/10.1038/ncomms1801

Buch, L. H., Sørensen, M. K., Berg, P., Pedersen, L. D. & Sørensen, A. C. (2012). Genomic selection strategies in breeding programs: Strong positive interaction between application of genotypic information and intensive use of young bulls on genetic gain. Journal of Animal Breeding and Genetics, 129(2), 138-151. https://doi.org/10.1111/j.1439-0388.2011.00947.x

Pedersen, L. D., Kargo, M., Berg, P., Voergaard, J., Buch, L. H. & Sørensen, A. C. (2012). Genomic selection strategies in dairy cattle breeding programmes: Sexed semen cannot replace multiple ovulation and embryo transfer as superior reproductive technology. Journal of Animal Breeding and Genetics, 129(2), 152-163. https://doi.org/10.1111/j.1439-0388.2011.00958.x

Thorup, V. M., Edwards, D. & Friggens, N. C. (2012). On-farm estimation of energy balance in dairy cows using only frequent body weight measurements and body condition score. Journal of Dairy Science, 95(4), 1784-1793. https://doi.org/10.3168/jds.2011-4631

Overgaard, J., Kristensen, T. N. & Sørensen, J. G. (2012). Validity of Thermal Ramping Assays Used to Assess Thermal Tolerance in Arthropods. PLoS One, 7(3), e32758. https://doi.org/10.1371/journal.pone.0032758.g001

Meier, K. & Hansen, M. M. (2012). Dna afslører: Dambrugsørreder har forurenet de vilde bestande. Ingeniøren.

Pedersen, K. S., Pedersen, L. D., Sørensen, A. C., Nielsen, A. B. & Kristensen, T. N. (2012). Investigating inbreeding depression for heat stress tolerance in the model organism Drosophila melanogaster. Journal of Biological Education, 46(1), 52-57. https://doi.org/10.1080/00219266.2011.561361