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Phenomics

The Phenomics Programme develops high-throughput phenotyping across livestock, insects, crops and agrobiodiversity. We combine computer vision, hyperspectral imaging, wearable and environmental sensors, and machine learning to extract quantitative traits from images, video, audio and sensor time series. We then validate these traits against biological reference measures and estimate their genetic parameters, so they can be used in genetic evaluation, precision management, welfare assessment and biodiversity monitoring.

Key Areas and Interests

High-throughput phenotyping     |     Computer vision and AI for trait extraction     |     Sensor and IoT data pipelines     |     Trait definition and genetic validation     |     Insect phenomics     |     Livestock health and welfare phenotyping     |     Crop and biodiversity phenotyping

Networks

EU COST Action CA22112 (EU-LI-PHE)     |     EU COST Action CA22140 (Insect-IMP)     |     Phenomics Working Group

Collaboration

We welcome partners from industry and academia, and students looking for MSc or PhD projects in phenotyping, computer vision or sensor data. Please contact the programme leader.

Infrastructure

Hyperspectral imaging (Specim FX17) for insects and other biological samples     |     Camera and audio systems for pig behaviour monitoring     |     IoT sensor network for barn microclimate in dairy cattle     |     On-farm data collection through the Danish cattle living lab (Cattle CoLab)

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