Publications

Peer-reviewed publications at QGG

Ba, H., Qin, T., Cai, Z., Liu, W. & Li, C. (2020). Molecular evidence for adaptive evolution of olfactory-related genes in cervids. Genes and Genomics, 42(4), 355-360. https://doi.org/10.1007/s13258-019-00911-w

Manzanilla-Pech, C. I. V., Gordo, D., Difford, G. F., Løvendahl, P. & Lassen, J. (2020). Multitrait genomic prediction of methane emissions in Danish Holstein cattle. Journal of Dairy Science, 103(10), 9195-9206. https://doi.org/10.3168/jds.2019-17857

Karaman, E., Lund, M. S. & Su, G. (2020). Multi-trait single-step genomic prediction accounting for heterogeneous (co)variances over the genome. Heredity, 124(2), 274-287. https://doi.org/10.1038/s41437-019-0273-4

Schonherz, A. A., Bødker, J. S., Schmitz, A., Brøndum, R. F., Jakobsen, L. H., Roug, A. S., Severinsen, M. T., El-Galaly, T. C., Jensen, P., Johnsen, H. E., Bøgsted, M. & Dybkær, K. (2020). Normal myeloid progenitor cell subsetassociated gene signatures for acute myeloid leukaemia subtyping with prognostic impact. PLOS ONE, 15(4), Article e0229593. https://doi.org/10.1371/journal.pone.0229593

Gebreyesus, G., Sahana, G., Christian Sørensen, A., Lund, M. S. & Su, G. (2020). Novel approach to incorporate information about recessive lethal genes increases the accuracy of genomic prediction for mortality traits. Heredity, 125, 155-166. https://doi.org/10.1038/s41437-020-0329-5

Wu, X., Mesbah-Uddin, M., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2020). Novel haplotypes responsible for prenatal death in Nordic Red and Danish Jersey cattle. Journal of Dairy Science, 103(5), 4570-4578. https://doi.org/10.3168/jds.2019-17831

Hutchings, N., Lærke, P. E., Munkholm, L. J., Elsgaard, L., Kristensen, T., Rasmussen, J., Lund, P., Børsting, C. F., Løvendahl, P., Mikkelsen, M. H., Albrektsen, R., Gyldenkærne, S., Møller, H. B., Hansen, M. J., Feilberg, A. & Adamsen, A. P. S., (2020). Opdatering af effekter og potentialer af klimavirkemidler til anvendelse i landbrug, No. 2019-0035910, 23 p., Mar 02, 2020.

Czech, B., Guldbrandtsen, B. & Szyda, J. (2020). Patterns of DNA variation between the autosomes, the X chromosome and the Y chromosome in Bos taurus genome. Scientific Reports, 10(1), Article 13641. https://doi.org/10.1038/s41598-020-70380-9

Chu, T. T., Sørensen, A. C., Lund, M. S., Meier, K., Nielsen, T. & Su, G. (2020). Phenotypically Selective Genotyping Realizes More Genetic Gains in a Rainbow Trout Breeding Program in the Presence of Genotype-by-Environment Interactions. Frontiers in Genetics, 11, Article 866. https://doi.org/10.3389/fgene.2020.00866

Schonherz, A. A., Szekeres, B. D., Nielsen, V. H. & Guldbrandtsen, B. (2020). Population structure and genetic characterization of two native Danish sheep breeds. Acta Agriculturae Scandinavica, Section A - Animal Science, 69(1-2), 53-67. https://doi.org/10.1080/09064702.2019.1639804

Slagboom, M., Hjortø, L., Sørensen, A. C., Mulder, H. A., Thomasen, J. R. & Kargo, M. (2020). Possibilities for a specific breeding program for organic dairy production. Journal of Dairy Science, 103(7), 6332-6345. https://doi.org/10.3168/jds.2019-16900

Su, G., Höglund, J., Christensen, O. F. & Lund, M. S. (2020). Possibilities for genetic improvement of pig survival until slaughter. DCA - Nationalt Center for Fødevarer og Jordbrug.

Holmqvist, V., Roos, L. K. S., Kjartansdottir, K. R., Dunø, M., Petersen, M. R., Hnida, C., Pedersen, I. S., Ernst, A., Toft, C. L. F., Diemer, T., Ingerslev, H. J., Pinborg, A. & Løssl, K. (2020). Præimplantationsgenetisk testning for aneuploidi. Ugeskrift for Læger, 181(4), Article V12180849.

Poulsen, B. G., Ask, B., Nielsen, H. M., Ostersen, T. & Christensen, O. F. (2020). Prediction of genetic merit for growth rate in pigs using animal models with indirect genetic effects and genomic information. Genetics, selection, evolution : GSE, 52(1), Article 58. https://doi.org/10.1186/s12711-020-00578-y

Gebreyesus, G., Difford, G. F., Buitenhuis, B., Lassen, J., Noel, S. J., Højberg, O., Plichta, D. R., Zhu, Z., Poulsen, N. A., Sundekilde, U. K., Løvendahl, P. & Sahana, G. (2020). Predictive ability of host genetics and rumen microbiome for subclinical ketosis. Journal of Dairy Science, 103(5), 4557-4569. https://doi.org/10.3168/jds.2019-17824

Larsen, F., Guldbrandtsen, B., Christensen, D., Pitcovski, J., Kjærup, R. B. & Dalgaard, T. S. (2020). Pustulan activates chicken bone marrow-derived dendritic cells in vitro and promotes ex vivo CD4⁺ T cell recall response to infectious bronchitis virus. Vaccines, 8(2), Article 226. https://doi.org/10.3390/vaccines8020226

Rohde, P. D., Fourie Sørensen, I. & Sørensen, P. (2020). qgg: an R package for large-scale quantitative genetic analyses. Bioinformatics (Oxford, England), 36(8), 2614-2615. https://doi.org/10.1093/bioinformatics/btz955

Poulsen, N. A., Hein, L., Kargo, M. & Buitenhuis, A. J. (2020). Realization of breeding values for milk fatty acids in relation to seasonal variation in organic milk. Journal of Dairy Science, 103(3), 2434-2441. https://doi.org/10.3168/jds.2019-17065

Gautason, E., Schonherz, A. A., Sahana, G. & Guldbrandtsen, B. (2020). Relationship of Icelandic cattle with Northern and Western European cattle breeds, admixture and population structure. Acta Agriculturae Scandinavica, Section A - Animal Science, 69(1-2), 25-38. https://doi.org/10.1080/09064702.2019.1699951

Hozé, C., Escouflaire, C., Mesbah-Uddin, M., Barbat, A., Boussaha, M., Deloche, M.-C., Boichard, D., Fritz, S. & Capitan, A. (2020). Short communication: A splice site mutation in CENPU is associated with recessive embryonic lethality in Holstein cattle. Journal of Dairy Science, 103(1), 607-612. https://doi.org/10.3168/jds.2019-17056

Tessema, B. B., Liu, H., Sørensen, A. C., Andersen, J. R. & Jensen, J. (2020). Strategies Using Genomic Selection to Increase Genetic Gain in Breeding Programs for Wheat. Frontiers in Genetics, 11, Article 578123. https://doi.org/10.3389/fgene.2020.578123

Mesbah-Uddin, M., Guldbrandtsen, B., Capitan, A., Lund, M. S., Boichard, D. & Sahana, G. (2020). Strategy to imputation of large genomic deletions and utilizing them in mapping and genomic prediction in cattle. Abstract from 6th International Conference of Quantitative Genetics, Brisbane, Australia. https://icqg6.org/wp-content/uploads/2020/11/ICQG6_2020_Abstract_Book.pdf

Zhang, Y., Ran, Y., Nagy, I., Lenk, I., Qiu, J. L., Asp, T., Jensen, C. S. & Gao, C. (2020). Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system. Plant Biotechnology Journal, 18(9), 1854-1856. https://doi.org/10.1111/pbi.13359

Malinowska, M., Nagy, I., Wagemaker, C. A. M., Ruud, A. K., Svane, S. F., Thorup-Kristensen, K., Jensen, C. S., Eriksen, B., Krusell, L., Jahoor, A., Jensen, J., Eriksen, L. B. & Asp, T. (2020). The cytosine methylation landscape of spring barley revealed by a new reduced representation bisulfite sequencing pipeline, WellMeth. The Plant Genome, 13(3), e20049. Article e20049. https://doi.org/10.1002/tpg2.20049

Ask, B., Christensen, O. F., Heidaritabar, M., Madsen, P. & Nielsen, H. M. (2020). The predictive ability of indirect genetic models is reduced when culled animals are omitted from the data. Genetics, selection, evolution : GSE, 52(1), Article 8. https://doi.org/10.1186/s12711-020-0527-x

Tsai, H.-Y., Cericola, F., Edriss, V., Andersen, J. R., Orabi, J., Jensen, J. D., Jahoor, A., Janss, L. & Jensen, J. (2020). Use of multiple traits genomic prediction, genotype by environment interactions and spatial effect to improve prediction accuracy in yield data. PLOS ONE, 15(5), Article e0232665. https://doi.org/10.1371/journal.pone.0232665

Sarup, P., Guo, X., Nielsen, N., Jensen, J. D., Mulder, F., Jihad, O., Edriss, V., Jahoor, A. & Jensen, J. (2020). Using NMR metabolomics in breeding for malt quality in spring barley. Abstract from International Symposium of the Society for Plant Breeding (GPZ), Tulln, Austria. https://gpz2020.boku.ac.at/wp-content/uploads/2020/03/06_Sarup.pdf

Vestergaard, M., Spleth, P., Stephansen, R., Kargo, M., Ettema, J. F. & Fogh, A. (2020). Utilizing beef x dairy crossbreds for beef production – Danish experiences. In Book of Abstracts of the 71st Annual Meeting of the European Federation of Animal Science (Vol. 26, pp. 317). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-900-8

Liu, A., Lund, M. S., Boichard, D., Karaman, E., Guldbrandtsen, B., Fritz, S., Aamand, G. P., Nielsen, U. S., Sahana, G., Wang, Y. & Su, G. (2020). Weighted single-step genomic best linear unbiased prediction integrating variants selected from sequencing data by association and bioinformatics analyses. Genetics Selection Evolution, 52(1), Article 48. https://doi.org/10.1186/s12711-020-00568-0

Harwood, S. L., Nielsen, N. S., Jensen, K. T., Nielsen, P. K., Thøgersen, I. B. & Enghild, J. J. (2020). α₂-macroglobulin-like protein 1 can conjugate and inhibit proteases through their hydroxyl groups, because of an enhanced reactivity of its thiol ester. Journal of Biological Chemistry, 295(49), 16732-16742. https://doi.org/10.1074/jbc.RA120.015694

Christensen, O. F., Nielsen, B., Su, G., Xiang, T., Madsen, P., Ostersen, T., Velander, I. & Strathe, A. B. (2019). A bivariate genomic model with additive, dominance and inbreeding depression effects for sire line and three-way crossbred pigs. Genetics Selection Evolution, 51(1), Article 45. https://doi.org/10.1186/s12711-019-0486-2

Nielsen, H. M. & Kargo, M. (2019). A conservation plan for the Danish Jutland horse. Abstract from Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Liu, H., Tessema, B. B., Jensen, J., Cericola, F., Andersen, J. R. & Sørensen, A. C. (2019). ADAM-Plant: A Software for Stochastic Simulations of Plant Breeding From Molecular to Phenotypic Level and From Simple Selection to Complex Speed Breeding Programs. Frontiers in Plant Science, 9, 1926. Article 1926. https://doi.org/10.3389/fpls.2018.01926

Poulsen, N. A., Robinson, R. C., Barile, D., Larsen, L. B. & Buitenhuis, B. (2019). A genome-wide association study reveals specific transferases as candidate loci for bovine milk oligosaccharides synthesis. BMC Genomics, 20, Article 404. https://doi.org/10.1186/s12864-019-5786-y

Mesbah-Uddin, M., Hoze, C., Michot, P., Barbat, A., Lefebvre, R., Boussaha, M., Sahana, G., Fritz, S., Boichard, D. & Capitan, A. (2019). A missense mutation (p.Tyr452Cys) in the CAD gene compromises reproductive success in French Normande cattle. Journal of Dairy Science, 102(7), 6340-6356. https://doi.org/10.3168/jds.2018-16100

Iso-Touru, T., Wurmser, C., Venhoranta, H., Hiltpold, M., Savolainen, T., Sironen, A., Fischer, K., Flisikowski, K., Fries, R., Vicente-Carrillo, A., Alvarez-Rodriguez, M., Nagy, S., Mutikainen, M., Peippo, J., Taponen, J., Sahana, G., Guldbrandtsen, B., Simonen, H., Rodriguez-Martinez, H. ... Pausch, H. (2019). A splice donor variant in CCDC189 is associated with asthenospermia in Nordic Red dairy cattle. BMC Genomics, 20(1), Article 286. https://doi.org/10.1186/s12864-019-5628-y

Bornhofen, E., Ramires, T. G., Bergonci, T., Nakamura, L. R. & Righetto, A. J. (2019). Associations between global indices of risk management and agricultural development. Agricultural Systems, 173, 281-288. https://doi.org/10.1016/j.agsy.2019.03.006

Fan, H., Hou, Y., Sahana, G., Gao, H., Zhu, C., Du, L., Zhao, F. & Wang, L. (2019). A Transcriptomic Study of the Tail Fat Deposition in Two Types of Hulun Buir Sheep According to Tail Size and Sex. Animals, 9(9), Article 655. https://doi.org/10.3390/ani9090655

Kargo, M. (2019). Avl. In T. Kristensen, J. O. Lehmann & L. Mogensen (Eds.), Fremtidens helhedsorienterede og balancerede kvægproduktion - visioner og udfordringer for malkekvægsbedriften frem mod år 2040 (Vol. 146, pp. 52-64).

Chu, T. T., Norberg, E., Henshall, J. & Jensen, J. (2019). Benefits of using genomic information for broiler breeding program in presence of GxE interactions. Abstract from Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Gao, H., Madsen, P., Aamand, G. P., Thomasen, J. R., Sørensen, A. C. & Jensen, J. (2019). Bias in estimates of variance components in populations undergoing genomic selection: a simulation study. BMC Genomics, 20(1), Article 956. https://doi.org/10.1186/s12864-019-6323-8

Malik, P. L., Janss, L., Nielsen, L. K., Borum, F., Jørgensen, H., Eriksen, B., Schjoerring, J. K. & Rasmussen, S. K. (2019). Breeding for dual-purpose wheat varieties using marker–trait associations for biomass yield and quality traits. Theoretical and Applied Genetics, 132(12), 3375-3398. https://doi.org/10.1007/s00122-019-03431-z

Clasen, J. B., Lehmann, J. O., Thomasen, J. R., Østergaard, S. & Kargo, M. (2019). Combining extended lactation with sexed semen in a dairy cattle herd: Effect on genetic and total economic return. Livestock Science, 223, 176-183. https://doi.org/10.1016/j.livsci.2019.03.001

Gebreyesus, G., Buitenhuis, A. J., Poulsen, N. A., Visker, M. H. P. W., Zhang, Q., van Valenberg, H. J. F., Sun, D. & Bovenhuis, H. (2019). Combining multi-population datasets for joint genome-wide association and meta-analyses: The case of bovine milk fat composition traits. Journal of Dairy Science, 102(12), 11124-11141. https://doi.org/10.3168/jds.2019-16676

Garnsworthy, P. C., Difford, G. F., Bell, M. J., Bayat, A. R., Huhtanen, P., Kuhla, B., Lassen, J., Peiren, N., Pszczola, M., Sorg, D., Visker, M. H. P. W. & Yan, T. (2019). Comparison of methods to measure methane for use in genetic evaluation of dairy cattle. Animals, 9(10), Article 837. https://doi.org/10.3390/ani9100837

Clasen, J., Kargo, M., Østergaard, S., Fikse, W. F., Rydhmer, L. & Strandberg, E. (2019). Consequences of crossbreeding, genotyping, and use of sexed semen and beef semen on genetic merit and profitability in Swedish dairy herds. 292-293. Abstract from ADSA Annual Meeting 2019, Cincinnati, Ohio, United States. https://www.adsa.org/Portals/0/SiteContent/Docs/Meetings/2019ADSA/2019ADSA_Abstract_Book.pdf?v20190715

Chu, T. T., Bastiaansen, J. W. M., Berg, P., Romé, H., Marois, D., Henshall, J. & Jensen, J. (2019). Correction to: Use of genomic information to exploit genotype-by-environment interactions for body weight of broiler chicken in bio-secure and production environments. Genetics Selection Evolution, 51(1), Article 68. https://doi.org/10.1186/s12711-019-0513-3

Wang, X., Gao, H., Gebremedhin, K. G., Bjerg, B. S., Van Os, J., Tucker, C. B. & Zhang, G. (2019). Corrigendum to “A predictive model of equivalent temperature index for dairy cattle (ETIC)” [J. Therm. Biol. (2018) 165–170]. Journal of Thermal Biology, 82, 252-253. https://doi.org/10.1016/j.jtherbio.2018.12.012

Schmidtmann, C., Kargo, M., Ettema, J. F., Hinrichs, D. & Thaller, G. (2019). Derivation of economic values for German dairy breeds. 609-609. Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Warner, D., Dettmann, F., Buitenhuis, A. J., Kargo, M., Hostrup Kjeldsen, A. M., Nielsen, N. H., Lefebvre, D. M. & Santschi, D. E. (2019). Development of a prediction equation for body weight change in early-lactating dairy cows by Fourier-transform infrared predicted fatty acid profiles in milk. Journal of Dairy Science, 102(Supplement 1), 109-110. Article 95. https://www.adsa.org/Portals/0/SiteContent/Docs/Meetings/2019ADSA/2019ADSA_Abstract_Book.pdf?v20190715

Clasen, J. B., Fogh, A. & Kargo, M. (2019). Differences between performance of F1 crossbreds and Holsteins at different production levels. Journal of Dairy Science, 102(1), 436-441. https://doi.org/10.3168/jds.2018-14975

Ruud, A. K., Malinowska, M., Bjarup Hansen, P., Svane, S. F., Eriksen, L. B., Fè, D., Jensen, C. S., Greve, M., Thorup-Kristensen, K., Nagy, I. & Asp, T. (2019). Differential gene expression and multi-omic analysis of drought stress in Lolium perenne. 287. Abstract from EGF-EUCARPIA Symposium, Grassland Science in Europe, Zurich, Switzerland. https://www.europeangrassland.org/fileadmin/documents/Infos/Printed_Matter/Proceedings/EGF2019.pdf

Cai, Z., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2019). Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle. BMC Genetics, 20, Article 15. https://doi.org/10.1186/s12863-019-0717-0

Pedersen, M. L. M., Velander, I. H., Nielsen, M. B. F., Lundeheim, N. & Nielsen, B. (2019). Duroc boars have lower progeny mortality and lower fertility than Pietrain boars1. Translational Animal Science, 3(2), 885-892. https://doi.org/10.1093/tas/txz036

Clasen, J., Kargo, M., Østergaard, S., Fikse, W. F., Rydhmer, L. & Strandberg, E. (2019). Effect of crossbreeding and using new techniques on genetic merit and economy in Swedish dairy herds. 285-285. Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Olijhoek, D., Hellwing, A. L. F., Grevsen, K., Haveman, L., Chowdhury, M. R., Løvendahl, P., Weisbjerg, M. R., Noel, S. J., Hojberg, O., Wiking, L. & Lund, P. (2019). Effect of dried oregano (Origanum vulgare L.) plant material in feed on methane production, rumen fermentation, nutrient digestibility, and milk fatty acid composition in dairy cows. Journal of Dairy Science, 102(11), 9902–9918. https://doi.org/10.3168/jds.2019-16329

Vargas-Beloo-Pérez, E., Dhakal, R., Kargo, M., Buitenhuis, A. J. & Poulsen, N. A. (2019). Effect of feeding managements on the milk concentrations of short- and medium-chain fatty acids. Abstract from 70th Annual Meeting of the European Federation of Animal Science (EAAP), Ghent, Belgium.

Steenfeldt, S., Sørensen, P. & Nielsen, B. L. (2019). Effects of choice feeding and lower ambient temperature on feed intake, growth, foot health, and panting of fast- and slow-growing broiler strains. Poultry Science, 98(2), 503-513. https://doi.org/10.3382/ps/pey323

Lee, A., Krawczel, P., Ternman, E. M., Schneider, L., Løvendahl, P. & Munksgaard, L. (2019). Effects of mean occupation rate on hourly automatic milking system use and total milk production in Holstein cows. Journal of Dairy Science, 102(Suppl. 1), 250-250. Article 262. https://www.adsa.org/Portals/0/SiteContent/Docs/Meetings/2019ADSA/2019ADSA_Abstract_Book.pdf?v20190715

Szalanski, M., Kristensen, T., Difford, G., Lassen, J., Buitenhuis, A. J., Pszczola, M. & Løvendahl, P. (2019). Enteric methane emission from Jersey cows during the spring transition from indoor feeding to grazing. Journal of Dairy Science, 102(7), 6319-6329. https://doi.org/10.3168/jds.2018-15984

Malinowska, M., Nagy, I., Ruud, A. K., Bjarup Hansen, P., Svane, S. F., Wagemaker, C. A. M., Krusell, L., Eriksen, B., Jahoor, A., Jensen, J. D., Fè, D., Lenk, I., Greve, M., Eriksen, L. B., Thorup-Kristensen, K., Jensen, C. S. & Asp, T. (2019). Epigenetics of drought responses in spring barley and perennial ryegrass. Abstract from The Plant and Animal Genome XXVII Conference (PAG) 2019, San Diego, United States.

Guo, X., Jensen, J. & Janss, L. (2019). Estimating epistasis in cereals for genomic prediction of unobserved crosses in a half diallel experiment. Abstract from The Plant and Animal Genome XXVII Conference (PAG) 2019, San Diego, United States. https://pag.confex.com/pag/xxvii/meetingapp.cgi/Paper/34819

Lee, A., Krawczel, P., Ternman, E. M., Schneider, L., Løvendahl, P. & Munksgaard, L. (2019). Evaluating the effects of mean occupation rate and milk production on two automatic milking systems. In R. C. Newberry & B. O. Braastad (Eds.), Proceedings of the 53rd Congress of the ISAE: Animal Lives Worth Living (pp. 302-302). Wageningen Academic Publishers. https://www.applied-ethology.org/ISAE_Meetings.html

Lee, A. R., Krawczel, P., Ternman, E. M., Schneider, L. G., Løvendahl, P. & Munksgaard, L. (2019). Evaluating the effects of mean stocking density on automatic milking system use and total milk production in Holstein cows. In Proceedings of the 2nd International Precision Dairy Farming Conference (pp. 71-72)

Olijhoek, D., Løvendahl, P., Hellwing, A. L. F., Weisbjerg, M. R. & Lund, P. (2019). Feed sorting of low and high concentrate diets by Holstein and Jersey dairy cows. 199. Abstract from British Society of Animal Science conference 2019, Edinburgh, United Kingdom.

Knorst, V., Yates, S., Byrne, S., Asp, T., Widmer, F., Studer, B. & Kölliker, R. (2019). First assembly of the gene-space of Lolium multiflorum and comparison to other Poaceae genomes. Grassland Science, 65(2), 125-134. https://doi.org/10.1111/grs.12225

Sahana, G. (2019). Genes for disease resistance in cattle – lessons learned from genome-wide association studies. 81-82. Abstract from XIV Agricultural Science Congress, New Delhi, India.

Zaalberg, R. M. (2019). Genetic analysis of Fourier transform infrared milk spectra in Danish dairy cattle. Århus Universitet.

Zaalberg, R. M., Shetty, N., Janss, L. & Buitenhuis, A. J. (2019). Genetic analysis of Fourier transform infrared milk spectra in Danish Holstein and Danish Jersey. Journal of Dairy Science, 102(1), 503-510. https://doi.org/10.3168/jds.2018-14464

Zhang, H., Liu, A., Li, X., Xu, W., Shi, R., Luo, H., Su, G., Dong, G., Guo, G. & Wang, Y. (2019). Genetic analysis of skinfold thickness and its association with body condition score and milk production traits in Chinese Holstein population. Journal of Dairy Science, 102(3), 2347-2352. https://doi.org/10.3168/jds.2018-15180

Guo, X. (2019). Genetic and Environmental Variation in Yield and Root Development in Winter Wheat Using a Semi-Field Phenotyping System. Abstract from Plant and Animal Genome Conference ASIA 2019, Shenzhen, China.

Lidauer, M., Leino, A.-M., Stephansen, R. B., Pösö, J., Fikse, F. & Aamand, G. P. (2019). Genetic Evaluation for Maintenance – Towards Genomic Breeding Values for Saved Feed in Nordic Dairy Cattle. In Interbull Bulletin: Proceedings of the 2019 Interbull Meeting (Vol. 55 (2019), pp. 21-25) https://journal.interbull.org/index.php/ib/article/view/177

Mebratie, W., Madsen, P., Hawken, R., Romé, H., Marois, D., Henshall, J., Bovenhuis, H. & Jensen, J. (2019). Genetic parameters for body weight and different definitions of residual feed intake in broiler chickens. Genetics Selection Evolution, 51(1), Article 53. https://doi.org/10.1186/s12711-019-0494-2

Rohde, P. D., Jensen, I. R., Sarup, P. M., Ørsted, M., Demontis, D., Sørensen, P. & Kristensen, T. N. (2019). Genetic Signatures of Drug Response Variability in Drosophila melanogaster. Genetics (Print), 213(2), 633-650. https://doi.org/10.1534/genetics.119.302381

Aliakbari, A., Ehsani, A., Vaez Torshizi, R., Løvendahl, P., Esfandyari, H., Jensen, J. & Sarup, P. (2019). Genetic variance of metabolomic features and their relationship with body weight and body weight gain in Holstein cattle. Journal of Animal Science, 97(9), 3832-3844. https://doi.org/10.1093/jas/skz228

Zhang, T., Gao, H., Sahana, G., Zan, Y., Fan, H., Liu, J., Shi, L., Liu, J., Du, L., Wang, L. & Zhao, F. (2019). Genome-wide association studies revealed candidate genes for tail fat deposition and body size in the Hulun Buir sheep. Journal of Animal Breeding and Genetics, 136(5), 362-370. https://doi.org/10.1111/jbg.12402

Gan, Q. F., Li, Y. R., Lund, M., Su, G. S. & Liang, X. W. (2019). Genome-wide association study identifies loci linked to serum electrolyte traits in Chinese Holstein cattle. Animal Genetics, 50(6), 744-748. https://doi.org/10.1111/age.12851

Mebratie, W., Reyer, H., Wimmers, K., Bovenhuis, H. & Jensen, J. (2019). Genome wide association study of body weight and feed efficiency traits in a commercial broiler chicken population, a re-visitation. Scientific Reports, 9, Article 922. https://doi.org/10.1038/s41598-018-37216-z

Kristensen, P. S., Jensen, J., Andersen, J. R., Guzmán, C., Jihad, O. & Jahoor, A. (2019). Genomic Prediction and Genome-Wide Association Studies of Flour Yield and Alveograph Quality Traits Using Advanced Winter Wheat Breeding Material. Genes, 10(9), Article 669. https://doi.org/10.3390/genes10090669

Guo, X., Cericola, F., Fè, D., Greve-Pedersen, M., Lenk, I., Jensen, C. S., Jensen, J. & Janss, L. (2019). Genomic Prediction in Tetraploid Ryegrass. Abstract from PAG 2017, San Diego, United States.

Kristensen, P. S. (2019). Genomic prediction of baking quality in winter wheat. Aarhus University.

Cao, L., Liu, H., Mulder, H. A., Henryon, M., Thomasen, J. R., Kargo, M. & Sørensen, A. C. (2019). Genomic selection breeding program benefits more than traditional one in presence of GxE. 528-528. Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Slagboom, M., Kargo, M., Sørensen, A. C., Thomasen, J. R. & Mulder, H. A. (2019). Genomic selection improves the possibility of applying multiple breeding programs in different environments. Journal of Dairy Science, 102(9), 8197-8209. https://doi.org/10.3168/jds.2018-15939

Robertsen, C. D., Hjortshøj, R. L. & Janss, L. L. (2019). Genomic selection in cereal breeding. Agronomy, 9(2), Article 95. https://doi.org/10.3390/agronomy9020095

Thomasen, J. R. & Lassen, J. (2019). Genomic Selection in the Nordic Countries. 45-47. Abstract from ZAR-Seminar 2019, Austria. https://www.rinderzucht.at/downloads/seminarunterlagen.html

Liu, A., Su, G., Höglund, J., Zhang, Z., Thomasen, J. R., Christiansen, I. A., Wang, Y. & Kargo, M. (2019). Genotype by environment interaction for female fertility traits under conventional and organic production systems in Danish Holsteins. Journal of Dairy Science, 102(9), 8134-8147. https://doi.org/10.3168/jds.2018-15482

Zhang, Z., Kargo, M., Liu, A., Thomasen, J. R., Pan, Y. & Su, G. (2019). Genotype-by-environment interaction of fertility traits in Danish Holstein cattle using a single-step genomic reaction norm model. Heredity, 123(2), 202-214. https://doi.org/10.1038/s41437-019-0192-4

Chu, T. T., Rome, H. J. S., Norberg, E., Marois, D., Henshall, J. & Jensen, J. (2019). GxE interactions of body weight for broilers raised in bio-secure and commercial environments. Abstract from Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

Wu, X., Mesbah-Uddin, M., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2019). Haplotypes responsible for early embryonic lethality detected in Nordic Holsteins. Journal of Dairy Science, 102(12), 11116-11123. https://doi.org/10.3168/jds.2019-16651

Wiking, L., Bjerring, M., Løkke, M. M., Løvendahl, P. & Kristensen, T. (2019). Herd factors influencing free fatty acid concentrations in bulk tank milk. Journal of Dairy Research, 86(2), 226-232. Article 0022029919000190. https://doi.org/10.1017/S0022029919000190

Larsen, F. T., Bed'hom, B., Guldbrandtsen, B. & Dalgaard, T. S. (2019). Identification and tissue-expression profiling of novel chicken c-type lectin-like domain containing proteins as potential targets for carbohydrate-based vaccine strategies. Molecular Immunology, 114(October), 216-225. https://doi.org/10.1016/j.molimm.2019.07.022

Mesbah-Uddin, M. (2019). Identification of causal factors for recessive lethals in dairy cattle with special focus on large chromosomal deletions. Århus Universitet.

Bordbar, F., Jensen, J., Zhu, B., Wang, Z., Xu, L., Chang, T., Xu, L., Du, M., Zhang, L., Gao, H., Xu, L. & Li, J. (2019). Identification of muscle-specific candidate genes in Simmental beef cattle using imputed next generation sequencing. PLOS ONE, 14(10), Article e0223671. https://doi.org/10.1371/journal.pone.0223671

Buitenhuis, B., Lassen, J., Noel, S. J., Plichta, D. R., Sørensen, P., Difford, G. F. & Poulsen, N. A. (2019). Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle. Genetics Selection Evolution, 51(1), Article 23. https://doi.org/10.1186/s12711-019-0464-8

de los Campos, G., Sorensen, D. A. & Toro, M. A. (2019). Imperfect linkage disequilibrium generates phantom epistasis (& perils of big data). G3: Genes, Genomes, Genetics, 9(5), 1429-1436. https://doi.org/10.1534/g3.119.400101

Liu, A., Lund, M. S., Boichard, D. A., Karaman, E., Fritz, S., Aamand, G. P., Nielsen, U. S., Wang, Y. & Su, G. (2019). Improvement of genomic prediction by integrating additional single nucleotide polymorphisms selected from imputed whole genome sequencing data. Heredity, 124(1), 37-49. https://doi.org/10.1038/s41437-019-0246-7

Wang, X., Lund, M. S., Ma, P., Janss, L., Kadarmideen, H. N. & Su, G. (2019). Improving genomic predictions by correction of genotypes from genotyping by sequencing in livestock populations. Journal of Animal Science and Biotechnology, 10, Article 8. https://doi.org/10.1186/s40104-019-0315-z

Chen, M., Su, G., Fu, J., Wang, A., Liu, J. F., Lund, M. S. & Guldbrandtsen, B. (2019). Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs. Evolutionary Applications, 12(2), 292-300. https://doi.org/10.1111/eva.12716

Mesbah-Uddin, M., Guldbrandtsen, B., Lund, M. S., Boichard, D. & Sahana, G. (2019). Joint imputation of whole-genome sequence variants and large chromosomal deletions in cattle. Journal of Dairy Science, 102(12), 11193-11206. https://doi.org/10.3168/jds.2019-16946

Kargo, M., Hein, L., Poulsen, N. A. & Buitenhuis, A. J. (2019). Keeping up with a healthy milk fatty acid profile requires selection. 604-604. Abstract from 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgium.

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Jette Odgaard Villemoes