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Publications

Peer-reviewed publications at QGG

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Wang, L., Madsen, P., Sapp, R., Henshall, J., Hawken, R., Alemu, S. W., Sørensen, A. C. & Jensen, J. (2016). Bias due to selective genotyping in genomic prediction using H-BLUP. Poster session presented at XXV World's Poultry Congress (WPC2016), Beijing, China.
Wang, L., Madsen, P., Sapp, R., Henshall, J., Hawken, R., Alemu, S. W., Sørensen, A. C. & Jensen, J. (2016). Bias due to selective genotyping in genomic prediction using H-BLUP. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Wu, X., Sahana, G., Guldbrandtsen, B. & Lund, M. S. (2016). Phenotypic effect of recessive embryonic lethal haplotypes on non-return rate in cattle. Abstract from 5th International Conference on Quantitative Genetics , Madison, United States.
Sahana, G., Zhang, Q., Guldbrandtsen, B. & Lund, M. S. (2016). Rare variants’ impact on female fertility in dairy cattle. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Katam, R., Sakata, K., Suravajhala, P., Pechan, T., Kambiranda, D. M., Naik, K. S., Guo, B. & Basha, S. M. (2016). Comparative leaf proteomics of drought-tolerant and -susceptible peanut in response to water stress. Journal of Proteomics, 143, 209-226. https://doi.org/10.1016/j.jprot.2016.05.031
Gebreyesus, G., Lund, M. S., Janss, L., Bovenhuis, H. & Buitenhuis, A. J. (2016). Fine mapping and genomic prediction for detailed milk protein composition. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Welderufael, B. G., Janss, L., De Koning, D.-J., Sørensen, L. P., Løvendahl, P. & Fikse, W. F. (2016). Joint genetic evaluation of mastitis susceptibility and recovery ability in Holstein cows. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Derks, M., Blavy, P., Höglund, J. & Friggens, N. (2016). Templates to classify progesterone profiles, built using real-time milk progesterone measurements. In C. Kamphuis & W. Steeneveld (Eds.), Precision Dairy Farming 2016 Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-829-2
Ashraf, B., Edriss, V., Akdemir, D., Autrique, E., Bonnett, D., Crossa, J., Janss, L., Singh, R. & Jannink, J. L. (2016). Genomic prediction using phenotypes from pedigreed lines with no marker data. Crop Science, 56(3), 957-964. https://doi.org/10.2135/cropsci2015.02.0111
Poulsen, J. B., Lescai, F., Grove, J., Bækvad-Hansen, M., Christiansen, M., Hagen, C. M., Maller, J., Stevens, C., Li, S., Li, Q., Sun, J., Wang, J., Nordentoft, M., Werge, T. M., Mortensen, P. B., Børglum, A. D., Daly, M., Hougaard, D. M., Bybjerg-Grauholm, J. & Hollegaard, M. V. (2016). High-Quality Exome Sequencing of Whole-Genome Amplified Neonatal Dried Blood Spot DNA. PLoS One, 11(4), e0153253. Article e0153253. https://doi.org/10.1371/journal.pone.0153253
Kargo, M., Hjortø, L., Slagboom, M., Thomasen, J. R., Buitenhuis, A. J., Hein, L., Pedersen, J. & Munk, A. (2016). SOBcows - Specialized organic breeding goals and breeding schemes within dairy production. Paper presented at Nordic workshop in dairy cattle genetics and genomics, Copenhagen, Denmark. http://orgprints.org/30151/
Begli, H. E., Torshizi, R. V., Masoudi, A. A., Ehsani, A. & Jensen, J. (2016). Longitudinal analysis of body weight, feed intake and residual feed intake in F2 chickens. Livestock Science, 184, 28-34. https://doi.org/10.1016/j.livsci.2015.11.018
Manzanares, C., Barth, S., Thorogood, D., Byrne, S., Yates, S., Czaban, A., Asp, T., Yang, B. & Studer, B. (2016). A Gene Encoding a DUF247 Domain Protein Cosegregates with the S Self-Incompatibility Locus in Perennial Ryegrass. Molecular Biology and Evolution, 33(4), 870-884. https://doi.org/10.1093/molbev/msv335
Michot, P., Chahory, S., Marete, A. G., Grohs, C., Dagios, D., Donzel, E., Aboukadiri, A., Deloche, M.-C., Allais-Bonnet, A., Chambrial, M., Barbey, S., Genestout, L., Boussaha, M., Danchin-Burge, C., Fritz, S., Boichard, D. & Capitan, A. (2016). A reverse genetic approach identifies an ancestral frameshift mutation in RP1 causing recessive progressive retinal degeneration in European cattle breeds. Genetics Selection Evolution, 48. https://doi.org/10.1186/s12711-016-0232-y
Shirali, M., Varley, P. F. & Jensen, J. (2016). Bayesian analysis of selection response on linear or ratio feed efficiency traits in pigs. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Thodberg, K., Sørensen, L. U., Videbech, P. B., Haun Poulsen, P., Houbak, B., Damgaard, V., Keseler, I., Edwards, D. & Christensen, J. W. (2016). Behaviour of nursing home residents towards a visiting animal and the human companion - A randomized controlled trial in 4 Danish nursing homes. In M. B. Jensen, K. Thodberg & J. W. Christensen (Eds.), Nordic ISAE 2016: Proceedings of the 26th Nordic Regional Symposium of the International Society for Applied Ethology (January 2016 ed., Vol. DCA Report No. 070, pp. 27-27). http://web.agrsci.dk/djfpublikation/djfpdf/DCArapport070.pdf
Szalanski, M., Difford, G., Løvendahl, P. & Lassen, J. (2016). Comparing methods to analyse raw, large-scale methane data. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Jardim, J. G., Sahana, G., Quirino, C., Peixoto, M., Santos, G. & Lund, M. S. (2016). Detection of QTL for mastitis resistance and related functional traits in Bos Taurus and Bos indicus. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Salleh, S. M., Mazzoni, G., Höglund, J., Olijhoek, D., Lund, P., Løvendahl, P. & Kadarmideen, H. (2016). Differential Expression of Genes between High and Low Feed Efficiency in Holstein and Jersey Cattle. Poster session presented at PAG ASIA 2016, Singapore.
Marete, A. G., Lund, M. S. & Boichard, D. A. (2016). Dissecting dairy complex traits beyond additive effects using genetic markers. Abstract from 19 thSéminaire des thésards du Département de Génétique Animale, Toulouse, France.
Marete, A. G., Lund, M. S. & Boichard, D. A. (2016). Dissecting dairy complex traits using genetic markers: combining GWASand functional pathways. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Shirali, M., Varley, P. F. & Jensen, J. (2016). ECO FCE: Value of RFI vs FCR in genetic selection programs. In ook of AbsBook of abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Sarup, P. M., Jensen, J., Shirali, M., Ostersen, T., H, R., Varley, P. & Sørensen, P. (2016). ECO-FCE: Integrative genomic models for FCE in monogastries. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Zetouni, L., Kargo, M. & Lassen, J. (2016). Fertility and health traits correlations with methane emissions. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Difford, G., Lassen, J. & Løvendahl, P. (2016). Genes and microbes, the next step in dairy cattle breeding. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
de Haas, Y., Pryce, J. E., Wall, E., McParland, S., Difford, G. & Lassen, J. (2016). Genetic and genomic analyses of enteric methane emissions of dairy cattle. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Le, T. H., Madsen, P., Lundeheim, N., Nilsson, K. & Norberg, E. (2016). Genetic association between leg conformation in young pigs and sow longevity. Journal of Animal Breeding and Genetics, 133(4), 283-290. https://doi.org/10.1111/jbg.12193
Mao, X., Sahana, G., Johansson, A. M., Ismael, A. I. S., Løvendahl, P., De Koning, D.-J. & Guldbrandtsen, B. (2016). Genome-wide association studies of additive and dominance effects for female fertility traits in Danish Holstein cattle. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.
Lassen, J., Løvendahl, P., Su, G. & Sahana, G. (2016). Genome-wide association study and genomic predicition for methane emission in Danish Holstein cattle. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Hamzic, E., Pinard-van der Laan, M.-H., Buitenhuis, A. J., Hawken, R. & Bed'Hom, B. (2016). Genome-wide association study of the Eimeria maxima response in Cobb500 broilers. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Lopes, M. S., Bastiaansen, J. W. M., Janss, L., Knol, E. F. & Bovenhuis, H. (2016). Genomic prediction of growth in pigs based on a model including additive and dominance effects. Journal of Animal Breeding and Genetics (Online), 133(3), 180-186. https://doi.org/10.1111/jbg.12195
Ankamah-Yeboah, T., Torp, A. M., Jensen, J. D., Janss, L. & Rasmussen, S. K. (2016). Genomic Selection for agronomic important traits in two-rowed winter barley. Abstract from 12th International Barley Genetics Symposium, Minneapolis, United States.
Li, B., Berglund, B., Fikse, W. F., Lassen, J. & Løvendahl, P. (2016). Heterogeneity in genetic variation for feed intake and adjusted feed intake between dairy cow breeds. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Liu, Y., Lucas-Hahn, A., Petersen, B., Li, R., Hermann, D., Hassel, P., Ziegler, M., Li, J., Larsen, K. E., Niemann, H. & Callesen, H. (2016). Histone acetylation profile of porcine embryos produced by 2 cloning methods with or without in-vitro culture. Reproduction, Fertility and Development, 28, 137 (abst 15). https://doi.org/10.1071/RDv28n2abs
Sarup, P. M., Jensen, J., Ostersen, T., Henryon, M. & Sørensen, P. (2016). Increased prediction accuracy using a genomic feature model including information on QTLs. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Sverrisdóttir, E., Janss, L., Byrne, S., Asp, T. & Lehmann Nielsen, K. (2016). Initiating genomic selection in tetraploid potato. Abstract from 13th Solanaceae Conference, Davis, United States.
Gebreyesus, G., Lund, M. S., Janss, L., Bovenhuis, H. & Buitenhuis, A. J. (2016). Modeling heterogeneous co-variancas for genomic regions in prediction for milk protein compositions. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Slagboom, M., Kargo, M., Edwards, D., Sørensen, A. C., Thomasen, J. R. & Hjortø, L. (2016). Organic and Conventional Dairy Farmers Prefer Different Improvements in Breeding Goal Traits. Poster session presented at 67th Annual Meeting of the European Association for Animal Production (EAAP), Belfast, United Kingdom.
Kargo, M. (2016). Possibilities and requirements for organic dairy breeding lines. Abstract from 67th Annual Meeting of the European Federation of Animal Science (EAAP 2016), Belfast, United Kingdom.
Slagboom, M., Kargo, M., Edwards, D., Sørensen, A. C., Thomasen, J. R. & Hjortø, L. (2016). Preferences for Breeding Goal Traits for Danish Red and Jersey Cattle. Abstract from 67th Annual Meeting of the European Association for Animal Production (EAAP), Belfast, United Kingdom.
Shetty, N., Løvendahl, P., Lund, M. S. & Buitenhuis, A. J. (2016). Representative sample selection using FT-IR milk spectra to predict dry matter intake in dairy cows. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Buitenhuis, A. J., Poulsen, N. A., Noel, S. J., Plichta, D. R. & Lassen, J. (2016). The impact of the rumen microbiome on the detailed milk fatty acid profile in Danish Holstein cattle. In ook of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8