Publikationer

Peer-reviewed publikationer ved QGG

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Slagboom, M., Wallenbeck, A., Hjortø, L., Sørensen, A. C., Thomasen, J. R. & Kargo, M. (2017). Simulating consequences of choosing a breeding goal for organic dairy cattle production. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.

Slagboom, M., Wallenbeck, A., Hjortø, L., Sørensen, A. C., Rydhmer, L., Thomasen, J. R. & Kargo, M. (2018). Simulating consequences of choosing a breeding goal for organic dairy production. Journal of Dairy Science, 101(12), 11086-11096. https://doi.org/10.3168/jds.2017-14316

Slagboom, M., Wallenbeck, A., Rydhmer, L., Thomasen, J. R. & Kargo, M. (2018). Breeding Goals for Organic Dairy Farming in Denmark Based on the Principles of Organic Agriculture. Afhandling præsenteret på ICAR Conference and World Congress on Genetics Applied to Livestock Production 2018, Auckland, New Zealand.

Slagboom, M., Mulder, H. A., Sørensen, A. C., Hjortø, L., Thomasen, J. R. & Kargo, M. (2018). Effects of specific breeding lines for organic dairy production in Denmark. Abstract fra 69th Annual Meeting of the European Federation of Animal Science EAAP 2018, Dubrovnik, Kroatien.

Slagboom, M., Kargo, M., Sørensen, A. C., Thomasen, J. R. & Mulder, H. A. (2019). Genomic selection improves the possibility of applying multiple breeding programs in different environments. Journal of Dairy Science, 102(9), 8197-8209. https://doi.org/10.3168/jds.2018-15939

Slagboom, M., Hjortø, L., Sørensen, A. C., Mulder, H. A., Thomasen, J. R. & Kargo, M. (2019). Possibilities for a specific breeding program for organic dairy production. 215-215. Abstract fra 70th Annual Meeting of the European Federation of Animal Science EAAP 2019, Ghent, Belgium, Ghent, Belgien.

Slagboom, M., Hjortø, L., Sørensen, A. C., Mulder, H. A., Thomasen, J. R. & Kargo, M. (2020). Possibilities for a specific breeding program for organic dairy production. Journal of Dairy Science, 103(7), 6332-6345. https://doi.org/10.3168/jds.2019-16900

Slagboom, M., Bengtsson, C., Thomasen, J. R. & Kargo, M. (2021). Consequences of genetic changes considering G by E and different production environments: GenTore WP5.4 Decision Support Tools. Billeder, Video- og Lydoptagelser (digital) https://www.youtube.com/watch?v=FOsG2Cw4YP8&feature=youtu.be

Slagboom, M., Sørensen, A. C., Thomasen, J. R., Liu, H., Kargo, M. & Hjortø, L. (2021). Ignoring genotype by environment interaction in the genetic evaluation of dairy cattle reduces accuracy but may increase selection intensity. Journal of Dairy Science, 104(12), 12756-12764. https://doi.org/10.3168/jds.2021-20876

Slagboom, M., Milkevych, V., Liu, H., Thomasen, J. R., Kargo, M. & Schmidtmann, C. (2022). Conservation of local Red cattle breeds by collaboration with a mainstream Red dairy cattle breed. Livestock Science, 260, Artikel 104936. https://doi.org/10.1016/j.livsci.2022.104936

Slagboom, M., Nielsen, H. M., Kargo, M., Henryon, M. & Hansen, L. S. (2023). Simulating breeding programs based on mass selection in black soldier fly (Hermetia illucens). Abstract fra
74th Annual Meeting of European Federation of Animal Science, Lyon, Frankrig.

Slagboom, M., Nielsen, H. M., Kargo, M., Henryon, M. & Hansen, L. S. (2024). The effect of phenotyping, adult selection, and mating strategies on genetic gain and rate of inbreeding in black soldier fly breeding programs. Genetics Selection Evolution, 56(1), Artikel 71. https://doi.org/10.1186/s12711-024-00938-y

Skovsted, K., Henryon, M., Rydhmer, L., Jensen, J. & Solanes, F. X. (2005). Growth rate of growing pigs is weakly correlated genetically with litter size, while the amount of genetic variation for growth rate changes with litter size. Acta Agriculturae Scandinavica, Section A - Animal Science, 55(2-3), 66-73.

Skovsgaard, H., Li, R., Liu, Y., Løvendahl, P., Holm, P., Hyttel, P. & Callesen, H. (2012). Development capacity of oocytes from pre- and post-pubertal pigs. Poster-session præsenteret på 28th Annual Meeting of the AETE, Saint Malo, Frankrig.

Skovsgaard, H., Li, R., Liu, Y., Løvendahl, P., Holm, P., Hyttel, P. & Callesen, H. (2013). Development capacity of pre- and postpubertal pig oocytes evaluated by somatic cell nuclear transfer and parthenogenetic activation. Reproduction, Fertility and Development, 25(1), 241-242. https://doi.org/10.1071/RDv25n1Ab185

Skovgård, H., Kristensen, K. & Hald, B. (2011). Retention of Campylobacter (Campylobacterales: Campylobacteraceae) in the house fly (Diptera: Muscidae). Journal of Medical Entomology, 48(6), 1202-1209. https://doi.org/10.1603/ME11061

Skovgaard, K., Mortensen, S., Boye, M., Hedegaard, J. & Heegaard, P. M. H. (2010). Hepatic gene expression changes in pigs experimentally infected with the lung pathogen Actinobacillus pleuropneumoniae as analysed with an innate immunity focused microarray. Innate Immunity, 16(6), 343-353. https://doi.org/10.1177/1753425909342730

Skovgaard, K., Mortensen, S., Hedegaard, J. & Heegaard, P. M. H. (2010). Local and disseminated acute phase response during bacterial respiratory infection in pigs. Poster-session præsenteret på European Colloquium on Acute Phase Proteins, Helsinki, Finland.

Skovbjerg, C. K., Knudsen, J. N., Füchtbauer, W., Stougaard, J., Stoddard, F. L., Janss, L. & Andersen, S. U. (2020). Evaluation of yield, yield stability, and yield–protein relationship in 17 commercial faba bean cultivars. Legume Science, 2(3), Artikel e39. https://doi.org/10.1002/leg3.39

Skovbjerg, C. K., Angra, D., Robertson-Shersby-Harvie, T., Kreplak, J., Keeble-Gagnère, G., Kaur, S., Ecke, W., Windhorst, A., Nielsen, L. K., Schiemann, A., Knudsen, J., Gutierrez, N., Tagkouli, V., Fechete, L. I., Janss, L., Stougaard, J., Warsame, A., Alves, S., Khazaei, H. ... Andersen, S. U. (2023). Genetic analysis of global faba bean diversity, agronomic traits and selection signatures. Theoretical and Applied Genetics, 136(5), Artikel 114. https://doi.org/10.1007/s00122-023-04360-8

Skovbjerg, C. K., Sarup, P. M., Wahlström, E., Jensen, J. D., Orabi, J., Jensen, J., Jahoor, A. & Ramstein, G. (2025). Multi-population GWAS detects robust marker associations in a newly established six-rowed winter barley breeding program. Heredity, 134(1), 33-48. Artikel 63. https://doi.org/10.1038/s41437-024-00733-x

Skovbjerg, C. K., Sarup, P., Wahlström, E., Jensen, J. D., Orabi, J., Olesen, L., Jensen, J., Jahoor, A. & Ramstein, G. (2025). Correction: Multi-population GWAS detects robust marker associations in a newly established six-rowed winter barley breeding program (Heredity, (2025), 134, 1, (33-48), 10.1038/s41437-024-00733-x). Heredity, 134(3), 248-249. https://doi.org/10.1038/s41437-025-00751-3

Skovbjerg, C. K., Sarup, P., Wahlström, E. M., Jensen, J. D., Olesen, L., Orabi, J., Jensen, J., Ramstein, G. P. & Jahoor, A. (2025). Genomic prediction in a small barley population can benefit from training on related populations. G3 (Bethesda, Md.), 15(11). https://doi.org/10.1093/g3journal/jkaf218, https://doi.org/10.1093/g3journal/jkaf218

Skøt, L., Webb, K. J. & Jørgensen, B. (1994). A study of the flexibility of the transformation system in Lotus japonicus. Lotus Newsletter, 25, 25-27. http://www.psu.missouri.edu/lnl/v25/Lotus_NL.htm

Skøt, L., Webb, K. J., Nicholson, M., Jørgensen, B. & Mizen, S. (1998). Use of T-DNA tagging to identify plant genes involved in symbiotic nitrogen fixation. I Proceedings of the 16th North American Conference on Symbiotic Nitrogen Fixation (s. 1)

Skjøth, F., Lohi, O. & Thomas, A. W. (1994). Genetic models for the inheritance of the silver colour mutation of foxes. Genetics Research, 64, 11-18.

Skjøth, F., Tøgersen, F. A. & Munksgaard, L. (2007). RSSI Based IndoorTracking of Cowns in Loose House Systems. I Conference Book (s. 26)

Skjøt, M., Pauly, M., Bush, M. S., McCann, M. C., Borkhardt, B. & Ulvskov, P. (2001). Modification of plant cell wall pectin by Golgi targeted expression of an endo-arabinanase. Poster-session præsenteret på International Cell Wall Meeting, Toulouse, Frankrig.

Skjøt, M. (2000). Aspergillus aculeatus endo-alpha-1,5-arabinanase precursor (ara1) mRNA, complete cds. Genbank accession no. AF300878.. Datasæt

Skjøt, M., Pauly, M., Bush, M. S., Borkhardt, B., McCann, M. C. & Ulvskov, P. (2002). Direct interference with rhamnogalacturonan I biosynthesis in Golgi vesicles. Plant Physiology, 129, 18.

Skjøt, M., Mikkelsen, R., Jørgensen, B., Ulvskov, P. & Borkhardt, B. (2003). Apoplastic endo-1,5-alpha-L-arabinase expression in potato (Solanum tuberosum L) inhibits stolon differentiation and results in accumulation of starch and ectopic expression of tuber specific transcripts in the stem. I Proc. Gordon Plant Cell Walls Research Conference

Skjøt, M., Kauppinen, S., Kofod, L. V., Fuglsang, C., Pauly, M., Dalboge, H. & Andersen, L. N. (2001). Functional cloning of an endo-arabinanase from Aspergillus aculeatus and its heterologous expression in A or oryzae and tobacco. Molecular Genetics and Genomics, 265(5).

Skjøt, M., Sørensen, S., Bush, M., Jørgensen, B., Borkhardt, B. & Ulvskov, P. (2000). Tuber-specific expression of a fungal endo-(1->5)-alpha-arabinanase in potato results in phenotypic alterations. Poster-session præsenteret på International Congress of Plant Molecular Biology, Quebec, Canada. https://doi.org/10.1007/BF02825286

Skjerve, T. A., Grova, L., Sorheim, L. K., Slagboom, M., Eriksson, S., Kargo, M. & Wallenbeck, A. (2018). Norwegian dairy farmers' preferences for breeding goal traits and associations with herd and farm characteristics. Acta Agriculturae Scandinavica, Section A - Animal Science, 68(3), 117-123. https://doi.org/10.1080/09064702.2019.1627406

Skarman, A., Jiang, L., Hornshøj, H., Buitenhuis, B., Hedegaard, J., Conley, L. N. & Sørensen, P. (2009). Gene set analysis of the EADGENE chicken data-set. BMC Proceedings, (4:S8). https://doi.org/10.1186/1753-6561-3-S4-S8

Skarman, A., Shariati, M. M. & Sørensen, P. (2010). Bayesian Variable Selection of Pathway Gene Sets Applied to Gene Expression Micrroarray. I Abstracts (s. 123). Gesellschaft für Tierzuchtwissenschaften e. V..

Skarman, A., Shariati, M. M. & Sørensen, P. (2010). Bayesian Variable Selection of Pathway Gene Sets Applied to Gene Expression Micrroarray. I CD communication - Proceedings, paper 395 Gesellschaft für Tierzuchtwissenschaften e. V..

Skarman, A., Mahdi Shariati, M., Janss, L., Jiang, L. & Sørensen, P. (2012). A Bayesian variable selection procedure for ranking overlapping gene sets. BMC Bioinformatics, 13(73), 1-9. https://doi.org/10.1186/1471-2105-13-73

Sjögren, A., Vajta, G., Knudsen, H., Lundin, K. & Hamberger, L. (1999). Improved culture conditions for human embryos by use of novel submarine hyperbaric incubation system. I Proc. The Second International Alpha Congress "Art, Science and Fiction", Abstract Book, No. P7 (s. 212)

Sjelborg, P., Kirknel, E., Kristensen, K., Paaske, K. & Laursen, B. (2007). Modeller af pesticidexponering i danske frugtplantager og væksthuse samt værnemidlernes effektivitet. Miljøstyrelsen. Bekæmpelsesmiddelforskning fra Miljøstyrelsen http://www.mst.dk/Udgivelser/publikationer/2007/10/978-87-7052-599-2.htm

Siwek, M., Buitenhuis, A. J., Cornelissen, S. J. B., Nieuwland, M. G. B., Bovenhuis, H., Parmentier, H. K., Crooijmans, R. P. M., Groenen, M. A. M. & van der Poel, J. J. (2004). QTL for natural antibodies in two populations of laying hens. I Book of Abstracts (s. 15)

Sivakumaran, A., Hebelstrup, K., Cristescu, S., Harren, F., Hall, M. A. & Mur , L. A. J. (2010). Nitric oxide generation triggers ethylene mediated resistance against Botrytis cinerea in tomato (Solanum esculutemum) and Arabidopsis. Abstract fra 3rd International Plant NO Club, Olomouc, Tjekkiet. http://pnog2010.upol.cz/

Sironen, A., Thomsen, B., Andersson, M., Ahola, V. & Vilkki, J. (2006). An intronic insertion in KLP2 result in aberrant splicing and causes the immotile short-tail sperm defect in the pig. Proceedings of the National Academy of Sciences (PNAS), 103(13), 5006-5011. https://doi.org/10.1073/pnas.0506318103

Sironen, A., Thomsen, B., Karttunen, P., Andersson, M., Ahola, V. & Vilkki, J. (2006). Identification of the genomic mutation causing the immotile short tail sperm defect and marker assisted selction in Finnish Yorkshire population. I Book of abstract: CD communication 22-04, 4 pp (s. 195). WCGALP. http://www.wcgalp8.org.br/wcgalp8/articles/paper/22_720-2086.pdf

Sironen, A., Thomsen, B., Andersson, M., Ahola, V. & Vilkki, J. (2006). Sus scrofa KPL2 protein (KPL2), mRNA. (GenBank Access. No NM_001044561). Datasæt

Sironen, A., Vilkki, J., Bendixen, C. & Thomsen, B. (2007). Infertile Finnish Yorkshire boars carry a full-length LINE-1 retrotransposon within the KPL2 gene. Molecular Genetics and Genomics, 278(4), 385-391. https://doi.org/10.1007/s00438-007-0256-7

Sironen, A., Hansen, J., Thomsen, B., Andersson, M., Vilkki, J., Toppari, J. & Kotaja, N. (2010). Expression of SPEF2 During Mouse Spermatogenesis and Identification of IFT20 as an Interacting Protein. Biology of Reproduction, 82(3), 580-590. https://doi.org/10.1095/biolreprod.108.074971

Sironen, A., Kotaja, N., Thomsen, B., Andersson, A. & Toppari, J. (2009). Elucidation of the role of a cilia associated gene SPEF2 in sperm tail development. Poster-session præsenteret på Pig Genome III Conference, Hinxton, Cambridge, Storbritannien.

Sironen, A., Thomsen, B., Andersson, M., Ahola, V. & Vilkki, J. (2006). An intronic insertion in KPL result in abnormal gene expression and causes the immotile short tail sperm defect in Finnish Large White. I Proc. of the 30th International Conference on Animal Genetics (s. 70). <Forlag uden navn>. http://drsolucoes.com.br/cbra/downloads/proceedings.pdf

Simonsen, O., Badsberg, J. H., Kjeldsen, K., Møller-Madsen, B. & Heron, I. (1986). The fall-off in serum concentration of tetanus antitoxin after primary and booster vaccination. Acta pathologica, microbiologica, et immunologica Scandinavica. Section C, Immunology, 94, 77-82.

Simmelsgaard, S. E., Kristensen, K., Andersen, H. E., Grant, R., Jørgensen, J. O. & Østergaard, H. S. (2000). Empirisk model til beregning af kvælstofudvaskning fra rodzonen: N-LES. DJF rapport Nr. 32

Simianer, H. & Sørensen, P. (2016). ICQG 5 on Madison's Isthmus links genomics and statistics of complex traits. Journal of Animal Breeding and Genetics, 133(4), 249-250. https://doi.org/10.1111/jbg.12231

Silahtarogly, A. N., Jensen, L. R., Harboe, T. L., Horn, P. & Bendixen, C. (2004). Sequencing and mapping of the porcine CCS gene. Animal Genetics, 35(4), 353-354. https://doi.org/10.1111/j.1365-2052.2004.01150.x

Sibbesen, E. & Skjøth, F. (1997). Tillage caused dispersion of soil in long-term field experiments. I Tillage Traslocation and Tillage Erosion Symposium in The 52nd Soil and Water Conservation Society Conference

Sibbesen, E., Skjøth, F. & Rubæk, G. H. (2000). Tillage caused dispersion of phosphorus in four 16-year-old field experiments. Soil and Tillage Research, 54, 91-100.

Sibbesen, E., Skjøth, F. & Christensen, B. T. (1995). Soil and substance movement between plots in long-term field experiments. I B. T. Christensen & U. Trentemøller (red.), The Askov Long-Term Experiments on Animal Manure and Mineral Fertilizers: 100th Anniversary Workshop (s. 136-153)

Sibbald, A. R., Maxwell, T. J., Griffiths, J. H., Hutchings, N. J., Taylor, C. M. A., Tabbush, P. M. & White, I. M. S. (1987). Agroforestry research in the hills and uplands. I M. Bell & R. G. H. Bunce (red.), Agriculture and Conservation in the Hills and Uplands (s. 74-77). Institute of Terrestrial Ecology Symposium No 23.

Si, J., Dai, D., Li, K., Fang, L. & Zhang, Y. (2023). A Multi-Tissue Gene Expression Atlas of Water Buffalo (Bubalus bubalis) Reveals Transcriptome Conservation between Buffalo and Cattle. Genes, 14(4), Artikel 890. https://doi.org/10.3390/genes14040890

Si, J., Dai, D., Gorkhali, N. A., Wang, M., Wang, S., Sapkota, S., Kadel, R. C., Sadaula, A., Dhakal, A., Faruque, M. O., Omar, A. I., Sari, E. M., Ashari, H., Dagong, M. I. A., Yindee, M., Rushdi, H. E., Elregalaty, H., Amin, A., Radwan, M. A. ... Zhang, Y. (2025). Complete Genomic Landscape Reveals Hidden Evolutionary History and Selection Signature in Asian Water Buffaloes (Bubalus bubalis). Advanced Science, 12(4), e2407615. Artikel 2407615. https://doi.org/10.1002/advs.202407615

Shukri, N. M., Holm, L.-E. & Brusgaard, K. (1996). A polymorphic trinucleotide microsatellite in cattle: BtDIAS1. Animal Genetics, 2, 373-373.

Shukri, N. M., Holm, L.-E., Brusgaard, K. & Bendixen, C. (1996). Isolation, characterization and evolution of bovine trinucleotide and tetranucleotide microsatelitte repeat sequences. I Animal Genetics 27, Suppl. 2 (s. 25)

Shukri, N. M., Brusgaard, K., Holm, L.-E. & Bendixen, C. (1996). Isolation and frequencies of trinucleotide and tetranucleotide repeat microsatelittes in the bovine genome. I Proceeding of the 5th Workshop of the Nordic Genome Initiative (s. 63)

Shukri, N. M., Holm, L.-E. & Brusgaard, K. (1995). Isolation and characterization of trinucleotide and tetranucleotide repeats microsatellites in bovine genome. Poster-session præsenteret på BovMap Meeting, Dublin, Irland.

Shufaro, Y., Vajta, G., Trounson, A. O. & Reubinoff, B. E. (2007). Vitrification of human embyonic stem cells. I M. J. Tucker & J. Liebermann (red.), Vitrification in Assisted Reproduction: Chapter 12 (s. 282-288). Informa Healthcare.

Shrestha, M., Bai, Z., Gholipourshahraki, T., Hjelholt, A. J., Hu, S., Kjolby, M., Rohde, P. D. & Sørensen, P. (2025). Enhanced genetic fine mapping accuracy with Bayesian Linear Regression models in diverse genetic architectures. PLoS Genetics, 21(7), 1-30. Artikel e1011783. https://doi.org/10.1371/journal.pgen.1011783

Shirali, M., Nielsen, V. H., Møller, S. H. & Jensen, J. (2014). Longitudinal Analysis of Residual Feed Intake in Mink using Random Regression with Heterogeneous Residual Variance. Afhandling præsenteret på 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada. https://event.crowdcompass.com/wcgalp2014/activity/S1kfSliDIg

Shirali, M., Nielsen, V. H., Møller, S. H. & Jensen, J. (2014). Random regression analysesusing Legendre polyomial to model body weight growth in mink. EAAP Scientific Series, 20, 406-406. http://www.wageningenacademic.com/eaap2014

Shirali, M., Nielsen, V. H., Møller, S. H. & Jensen, J. (2014). Feed efficiency and body weight growth throughout growing-furring period in mink using random regression method. I NJF Seminar (s. 113-121)

Shirali, M., Nielsen, V. H., Møller, S. H. & Jensen, J. (2015). Longitudinal analysis of residual feed intake and BW in mink using random regression with heterogeneous residual variance. Animal, 8(10), 1597-1604. https://doi.org/10.1017/S1751731115000956

Shirali, M., Hansen, B. K. & Jensen, J. (2015). Genetics of feed efficiency in brown mink of commercial farm. I Proceedings of NJF fur animal seminar 485 (s. 214-220)

Shirali, M., Varley, P. F. & Jensen, J. (2015). Genetic background of longitudinal feed efficiency and feeing behaviour traits in Maxgro pigs. I Book of Abstracts of the 66th Annual Meeting of the European Federation of Animal Science (Bind 21, s. 307-307). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-816-2

Shirali, M., Varley, P. F. & Jensen, J. (2015). Horizontal model a novel approach for dissertign genetic background of feed efficiency complex. I Abstracts of the 66th Annual Meeting of the European Federation of Animal Science (Bind 21, s. 459-459). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-816-2

Shirali, M., Varley, P. F. & Jensen, J. (2016). Bayesian analysis of selection response on linear or ratio feed efficiency traits in pigs. I Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8

Shirali, M., Varley, P. F. & Jensen, J. (2016). ECO FCE: Value of RFI vs FCR in genetic selection programs. I ook of AbsBook of abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8

Shirali, M., Varley, P. F. & Jensen, J. (2017). Longitudinal genetic dissection of feed efficiency and feeding behaviour in MaxGro pigs. Livestock Science, 199, 79-85. https://doi.org/10.1016/j.livsci.2017.03.017

Shirali, M., Strathe, A. B., Mark, T., Nielsen, B. & Jensen, J. (2017). Joint analysis of longitudinal feed intake and single recorded production traits in pigs using a novel Horizontal model. Journal of Animal Science, 95(3), 1050-1062. https://doi.org/10.2527/jas.2016.0606

Shirali, M., Varley, P. F. & Jensen, J. (2018). Bayesian estimation of direct and correlated responses to selection on linear or ratio expressions of feed efficiency in pigs. Genetics Selection Evolution, 50(1), Artikel 33. https://doi.org/10.1186/s12711-018-0403-0

Shirali, M., Nielsen, B. J., Ostersen, T., Christensen, O. F., Madsen, P., Su, G. & Jensen, J. (2018). Modelling of grouped recorded data for different population structures in pig breeding. Abstract fra 69th Annual Meeting of the European Federation of Animal Science EAAP 2018, Dubrovnik, Kroatien.

Shibabaw, W., Shirali, M., Madsen, P., Hawken, R. & Jensen, J. (2015). Genetic parameters of body weight at different stages of growth in male and femal broiler chicken. I Book of Abstracts of the 66th Annual Meeting of the European Federation of Animal Science (Bind 21, s. 395-395). https://doi.org/10.3920/978-90-8686-816-2

Shi, C., Ingvardsen, C., Thümmler, F., Wenzel, G., Melchinger, A. E. & Lübberstedt, T. (2005). Identification of genes differentially expressed in association with SCMV resistance in maize by combining SSH and cDNA array techniques. Molecular Genetics and Genomics, 273(6), 450-461. https://doi.org/10.1007/s00438-004-1103-8

Shi, C., Thümmler, F., Wenzel, G., Melchinger, A. E. & Lübberstedt, T. (2005). Differential gene expression in association with SCMV resistance comparing resistant and susceptible maize inbreds. Molecular Breeding, 16(2), 173-184. https://doi.org/10.1007/s11032-005-8357-7

Shi, C., Wenzel, G., Frei, U. K. & Lübberstedt, T. (2005). From genomics to functional markers in maize. Progress in Botany 67, Plant Science, 170, 53-70.

Shi, C., Thümmler, F., Wenzel, G., Melchinger, A. E. & Lübberstedt, T. (2006). Identification of genes differentially expressed in association with SCMV resistance in maize using comprehensive microarrays. Plant Science, 170(1), 159-169. https://doi.org/10.1016/j.plantsci.2005.08.016

Shi, C., Koch, G., Ouzunova, M., Wenzel, G., Zein, I. & Lübberstedt, T. (2006). Comparison of maize brown-midrib isogenic lines by cellular UV-microspectrophotometry and comparative transcript profiling. Plant Molecular Biology, 62, 697-714. https://doi.org/10.1007/s11103-006-9049-3

Shi, C., Uzarowska, A., Ouzunova, M., Wenzel, G. & Lübberstedt, T. (2007). Association between cell wall digestibility and candidate gene expression profiles by application of genetical genomics to a Flint x Flint maize recombinant inbred line population. BMC Genomics, 8(22), 1-14. https://doi.org/10.1186/1471-2164-8-22

Shi, R., Brito, L. F., Liu, A., Luo, H., Chen, Z., Liu, L., Guo, G., Mulder, H., Ducro, B., van der Linden, A. & Wang, Y. (2021). Genotype-by-environment interaction in Holstein heifer fertility traits using single-step genomic reaction norm models. BMC Genomics, 22(1), Artikel 193. https://doi.org/10.1186/s12864-021-07496-3

Shi, S., Li, X., Fang, L., Liu, A., Su, G., Zhang, Y., Luobu, B., Ding, X. & Zhang, S. (2021). Genomic Prediction Using Bayesian Regression Models With Global-Local Prior. Frontiers in Genetics, 12, Artikel 628205. https://doi.org/10.3389/fgene.2021.628205

Shi, L., Wang, L., Fang, L., Li, M., Tian, J., Wang, L. & Zhao, F. (2022). Integrating genome-wide association studies and population genomics analysis reveals the genetic architecture of growth and backfat traits in pigs. Frontiers in Genetics, 13, Artikel 1078696. https://doi.org/10.3389/fgene.2022.1078696

Shi, R., Chen, Z., Su, G., Luo, H., Liu, L., Guo, G. & Wang, Y. (2023). Genomic prediction of service sire effect on female reproductive performance in Holstein cattle: A comparison between different methods, validation population and marker densities. Journal of Animal Breeding and Genetics, 140(4), 355-365. https://doi.org/10.1111/jbg.12763

Shi, R., van der Linden, A., Ducro, B., Puillet, L. & Bouquet, A. (2025). Assessing future economic and environmental impacts of selecting resilient dairy cows using integrated mechanistic and genetic modelling. Animal, 19(12), Artikel 101716. https://doi.org/10.1016/j.animal.2025.101716

Shi, T., Shan, H., Wang, H., Guo, X., Li, H., Han, B., Zhu, S., Wang, F., Tan, G., Niyazbekova, Z., Ren, J., Zhou, Y., Zhang, Q., Zheng, W., Jia, M., Zhang, A., Cao, X., Sun, H., Sun, D. ... Jiang, Y. (2026). Single-Cell Transcriptomic Atlases of Camels and Cattle Unravel Molecular Evolution of Digestive and Metabolic Systems. Advanced Science, 13(20), Artikel e19346. https://doi.org/10.1002/advs.202519346

Shewale, A., Mokhade, A., Lipare, A. & Bokde, N. D. (2024). Efficient Techniques for Residential Appliances Scheduling in Smart Homes for Energy Management Using Multiple Knapsack Problem. Arabian Journal for Science and Engineering, 49(3), 3793-3813. https://doi.org/10.1007/s13369-023-08178-w

Shetty, N. P., Kristensen, B. K., Newman, M. A., Møller, K., Jørgensen, H. J. L. & Gregersen, P. L. (2003). Association of hydrogen peroxide with restriction of Septoria tritici in resistant wheat. Physiological and Molecular Plant Pathology, 62(6), 333-346. https://doi.org/10.1016/S0885-5765(03)00079-1

Shetty, N., Raju, C. S., Gislum, R., Møller, H. B., Ward, A. J. & Lærke, P. E. (2009). NIR-spectroscopy for measurement of quality parameters in plants for biogas. I NJF Seminar 413 Agricultural applications of NIRS and NIT (s. 72) http://www.njf.nu/filebank/files/20100205$211102$fil$n4JHGsicf0710a3ol5PG.pdf

Shetty, N., Raju, C. S., Gislum, R., Møller, H. B., Ward, A. J. & Lærke, P. E. (2009). NIR-spectroscopy for measurement of quality parameters in plants for biogas. Poster-session præsenteret på NJF Seminar: Agricultural applications of NIRS and NIT, Slagelse, Danmark.

Shetty, N., Løvendahl, P., Lund, M. S. & Buitenhuis, A. J. (2016). Representative sample selection using FT-IR milk spectra to predict dry matter intake in dairy cows. I Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8

Shetty, N., Løvendahl, P., Lund, M. S. & Buitenhuis, A. J. (2017). Prediction and validation of residual feed intake and dry matter intake in Danish lactating dairy cows using mid-infrared spectroscopy of milk. Journal of Dairy Science, 100(1), 253-264. https://doi.org/10.3168/jds.2016-11609

Shetty, N., Difford, G., Lassen, J., Løvendahl, P. & Buitenhuis, A. J. (2017). Predicting methane emissions of lactating Danish Holstein cows using Fourier transform mid-infrared spectroscopy of milk. Journal of Dairy Science, 100(11), 9052-9060. https://doi.org/10.3168/jds.2017-13014

Shetty, N., Difford, G., Lassen, J., Løvendahl, P. & Buitenhuis, A. J. (2017). Feasibility of FT-IR-milk spectra to predict methane emissions in danish lactating dairy cows. 199. Abstract fra 68th Annual Meeting of the European Federation of Animal Science , Tallinn, Estland.

Shetty, N., Janss, L., Zaalberg, R. M., Kargo, M. & Buitenhuis, A. J. (2018). Lactation stage dependent genome-wide association mapping for longitudinal data of milk fatty acids in dairy cattle using Bayesian mixture models. 321. Abstract fra The 11th World Congress on Genetics Applied to Livestock Production , Auckland, New Zealand.

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