Publications

Peer-reviewed publications at QGG

2014

Contribution to journal

Kadri, N. K., Sahana, G., Guldbrandtsen, B., Lund, M. S. & Druet, T. (2014). Efficiency of haplotype-based methods to fine-map QTLs and embryonic lethals variants affecting fertility: illustration with a deletion segregating in Nordic Red cattle Corresponding. Livestock Science, 166, 167-175. https://doi.org/10.1016/j.livsci.2014.04.030

Jiang, L., Edwards, S. M., Thomsen, B., Workman, C. T., Guldbrandtsen, B. & Sørensen, P. (2014). A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records. BMC Bioinformatics , 15(315), 1-13. https://doi.org/10.1186/1471-2105-15-315

Jensen, P., Overgaard, J., Loeschcke, V., Schou, M. F., Malte, H. & Kristensen, T. N. (2014). Inbreeding effects on standard metabolic rate investigated at cold, benign and hot temperatures in Drosophila melanogaster. Journal of Insect Physiology, 62, 11-20. https://doi.org/10.1016/j.jinsphys.2014.01.003

Janss, L., Sigsgaard, T. & Sorensen, D. (2014). Whole-Genome Analyses of lung function, height and smoking. Annals of Human Genetics, 78(6), 452-467. https://doi.org/10.1111/ahg.12078

Höglund, J., Sahana, G., Brøndum, R. F., Guldbrandtsen, B., Buitenhuis, A. J. & Lund, M. S. (2014). Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data. B M C Genomics, 15(790), 1-10. https://doi.org/10.1186/1471-2164-15-790

Höglund, J., Sahana, G., Guldbrandtsen, B. & Lund, M. S. (2014). Validation of Associations for Female Fertility Traits in Nordic Holstein, Nordic red and Jersey Dairy Cattle. B M C Genetics, 15(8), 1-7. https://doi.org/10.1186/1471-2156-15-8

Gustavsson, F., Buitenhuis, A. J., Johansson, M., Bertelsen, H. P., Glantz, M., Poulsen, N. A., Månsson, H. L., Stålhammer, H., Larsen, L. B., Bendixen, C., Paulsson, M. & Andrén, A. (2014). Effects of breed and casein genetic variants on protein profile in milk from Swedish Red, Danish Holstein, and Danish Jersey. Journal of Dairy Science, 97(6), 3866-3877. https://doi.org/10.3168/jds.2013-7312

Gustavsson, F., Glantz, M., Buitenhuis, A. J., Lindmark-Månsson, H., Stålhammar, H., Andrén, A. & Paulsson, M. (2014). Factors influencing chymosin-induced gelation of milk from individual dairy cows: Major effects of casein micelle size and calcium. International Dairy Journal, 39(1), 201-208. https://doi.org/10.1016/j.idairyj.2014.06.011

Gustavsson, F., Buitenhuis, A. J., Glantz, M., Stalhammar, H., Lindmark-Mansson, H., Poulsen, N. A., Larsen, L. B., Andren, A. & Paulsson, M. (2014). Impact of genetic variants of milk proteins on chymosin-induced gelation properties of milk from individual cows of Swedish Red dairy cattle. International Dairy Journal, 39(1), 102-107. https://doi.org/10.1016/j.idairyj.2014.05.007

Guo, G., Zhao, F., Wang, Y., Zhang, Y., Du, L. & Su, G. (2014). Comparison of single-trait and multiple-trait genomic prediction models. BMC Genetics, 15(30), 1-7. https://doi.org/10.1186/1471-2156-15-30

Guo, G., Guo, X., Wang, Y., Zhang, X., Zhang, S., Li, X., Liu, L., Shi, W., Usman, T., Wang, X., Du, L. & Zhang, Q. (2014). Estimation of genetic parameters of fertility traits in Chinese Holstein cattle. Canadian Journal of Animal Science, 94(2), 281-285. https://doi.org/10.4141/CJAS2013-113

Greve, M. H., Christensen, O. F., Greve, M. B. & Bou Kheir, R. (2014). Change in peat coverage in Danish cultivated soils during the past 35 years. Journal of Soil Science, 179(5), 250-257. https://doi.org/10.1097/SS.0000000000000066

Gebreyesus, G., Haile, A. & Dessie, T. (2014). Evaluation of growth trends in the short-eared somali goat breed of eastern Ethiopia. Research Journal of Applied Sciences, 9(5), 224-227.

Galesloot, T. E., Van Steen, K., Kiemeney, L. A. L. M., Janss, L. L. & Vermeulen, S. H. (2014). A comparison of multivariate genome-wide association methods. P L o S One, 9(4), 1-8. Article e95923. https://doi.org/10.1371/journal.pone.0095923

Früh, B., Bochicchio, D., Edwards, S., Hegelund, L., Leeb, C., Sundrum, A., Werne, S., Wiberg, S. & Prunier, A. (2014). Description of organic pig production in Europe. Organic Agriculture, 4(2), 83-92. https://doi.org/10.1007/s13165-013-0056-9

Farrell, J. D., Byrne, S., Paina, C. & Asp, T. (2014). De novo assembly of the perennial ryegrass transcriptome using an RNA-seq strategy. P L o S One, 9(8), Article e103567. https://doi.org/10.1371/journal.pone.0103567

de los Campos, G. & Sorensen, D. (2014). On the genomic analysis of data from structured populations. Journal of Animal Breeding and Genetics, 131(3), 163-164. https://doi.org/10.1111/jbg.12091

Della Riva, A., Kristensen, T., De Marchi1, M., Kargo, M., Jensen, J. & Cassandro, M. (2014). Carbon footprint from dairy farming system: comparison between Holstein and Jersey cattle in Italian circumstances. Acta Agraria Kaposvàriensis, 18(Supplement 1), 75-80.

Daetwyler, H. D., Capitan, A., Pausch, H., Stothard, P., van Binsbergen, R., Brøndum, R. F., Liao, X., Djari, A., Rodriguez, S. C., Grohs, C., Jung, S., Esquerré, D., Bouchez, O., Gollnick, N. S., Rossignol, M.-N., Klopp, C., Rocha, D., Fritz, S., Eggen, A. ... Hayes, B. J. (2014). Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle. Nature Genetics, 46(8), 858 - 865.

Christensen, O. F. (2014). Correction: Compatibility of pedigree-based and marker-based relationship matrices for single-step genetic evaluation. Genetics Selection Evolution, 46(1), Article 20. https://doi.org/10.1186/1297-9686-46-20

Christensen, O. F., Madsen, P., Nielsen, B. & Su, G. (2014). Genomic evaluation of both purebred and crossbred performances. Genetics Selection Evolution, 46(23), 1-16. https://doi.org/10.1186/1297-9686-46-23

Castro Dias Cuyabano, B., Su, G. & Lund, M. S. (2014). Genomic prediction of genetic merit using LD-based haplotypes in the Nordic Holstein population. B M C Genomics, 15, 1-11. Article 1171. https://doi.org/10.1186/1471-2164-15-1171

Cantet, R. J. C., Christensen, O. F., Pérez-Enciso, M. & van der Werf, J. H. J. (2014). 10th WCGALP in beautiful Vancouver. Journal of Animal Breeding and Genetics, 131(5), 409-412. https://doi.org/10.1111/jbg.12119

Buitenhuis, B., Janss, L. L. G., Poulsen, N. A., Larsen, L. B., Larsen, M. K. & Sørensen, P. (2014). Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle. B M C Genomics, 15(1112), 1-11. https://doi.org/10.1186/1471-2164-15-1112

Brøndum, R. F., Guldbrandtsen, B., Sahana, G., Lund, M. S. & Su, G. (2014). Strategies for imputation to whole genome sequence using a single or multi-breed reference population in cattle. B M C Genomics, 15(728), 1-8. https://doi.org/10.1186/1471-2164-15-728

Bouwman, A. C., Valente, B. D., Janss, L. L. G., Bovenhuis, H. & Rosa, G. J. M. (2014). Exploring causal networks of bovine milk fatty acids in a multivariate mixed model context. Genetics Selection Evolution, 46(2), 1-2. https://doi.org/10.1186/1297-9686-46-2

Berry, D. P., Coffey, M. P., Pryce, J. E., de Haas, Y., Løvendahl, P., Krattenmacher, N., Crowley, J. J., Wang, Z., Spurlock, D., Weigel, K., Macdonald, K. & Veerkamp, R. F. (2014). International genetic evaluations for feed intake in dairy cattle through the collation of data from multiple sources. Journal of Dairy Science, 97(6), 3894-3904. https://doi.org/10.3168/jds.2013-7548

Ashraf, B., Jensen, J., Asp, T. & Janss, L. (2014). Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing. Theoretical and Applied Genetics, 127(6), 1331-1341. https://doi.org/10.1007/s00122-014-2300-4

Anneberg, I., Kudahl, A. B. & Ettema, J. F. (2014). Tal kan motivere - men også skabe skepsis. Dansk Veterinærtidsskrift, 10, 18-21.

Andersen, J. P., Norup, L. R., Dalgaard, T. S., Kaiser, P., Permin, A., Schou, T. W., Vadekær, D. F., Jungersen, G., Sørensen, P. & Juul-Madsen, H. R. (2014). Cytokine gene expression profiles in chicken spleen and intestinal tissues during Ascaridia galli infection. Veterinary Parasitology, 206(3-4), 317-321. https://doi.org/10.1016/j.vetpar.2014.10.016

Alemu, S. W., Berg, P., Janss, L. & Bijma, P. (2014). Indirect genetic effects and kin recognition: estimationg IGEs wehn interactions differ between kin and strangers. Heredity, 112, 197-206. https://doi.org/10.1038/hdy.2013.92

Alemu, S. W., Bijma, P., Møller, S. H., Janss, L. & Berg, P. (2014). Indirect genetic effects contribute substantially to heritable variation in aggression-related traits in group-housed mink (Neovison vison). Genetics Selection Evolution, 46(30). https://doi.org/10.1186/1297-9686-46-30

2013

Non textual

Edwards, S. M. (2013). R/BioConductor: AnnotationFuncs: Annotation translation functions for BioConductor data packages. Computer programme http://bioconductor.org/packages/release/bioc/html/AnnotationFuncs.html

2013

Other contribution

Pickering, N. K., de Haas, Y., Cammack, K., Hayes, B., Hegarty, R. S., Lassen, J., McEwan, J. C., Miller, S., Pinares-Patino, C. S., Shackell, G., Vercoe, P. & Oddy, V. H. (2013, Nov 18). Consensus methods for breeding low methane emitting animals. http://www.asggn.org/publications,listing,95,mpwg-white-paper.html

Hjortø, L., Ettema, J., Sørensen, A. C., Fog, A. & Kargo, M. (2013, Feb 4). Large scale genomic testing within herd does not affect contribution margin. https://www.landbrugsinfo.dk/kvaeg/avl/avlsvaerdital-for-malkekvaeg/sider/Herd_GT.pdf

2013

Sørensen, A. C., (2013). Vedr: Genansøgning om ministeriel anerkendelse af Dansk Connemara Pony Selskab som avlsforening, No. 1072668, 2 p., Jul 25, 2013.

Sørensen, A. C., (2013). Vedrørende ansøgning om anerkendelse som avlsforbund af Dansk Miniature Heste Forening, DMHF, No. 1072615, 6 p., Jul 25, 2013.

Sørensen, A. C., (2013). Vedr: Vurdering af populationsstørrelse for bæredygtigt avlsarbejde - ”Avlsforeningen for Connemaraponyer i Danmark”, No. 1072682, 1 p., Jul 25, 2013.

Sørensen, A. C., (2013). Vedr.: Vurdering af populationsstørrelse og avlsmæssige målsætninger for bæredygtigt avlsarbejde - Dansk Connermara Pony Selskab, No. 1156165, 2 p., Dec 20, 2013.

Lassen, J., (2013). Avl for ressource- og miljøeffektivitet hos husdyr, No. 1162309, 17 p., Aug 07, 2013.

2013

Contribution to conference

Thirstrup, J. P., Pujolar, J. M., Larsen, P. F., Jensen, J., Nielsen, R. O. & Pertoldi, C. (2013). De novo SNP calling from RAD sequences for a mink (Neovison vison) specific genotyping assay. Paper presented at NJF Autumn meeting in Fur Animal Research , Reykjavik, Iceland.

Welderufael, B. G., De Koning, D.-J., Fikse, W. F., Strandberg, E., Franzén, J. & Christensen, O. F. (2013). Genetic evaluation of mastitis liability and recovery through longitudinal models of simulated SCC. Abstract from 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France.

Thodberg, K., Uhrskov, L., Christensen, J. W., Edwards, D., Poulsen, P. H., Houbak, B., Damgaard, V. J., Keseler, I. & Videbech, P. (2013). The effects of bi-weekly visits accompanied by either a dog, a robot seal (PARO) or a soft toy cat on sleep patterns and mental health of nursing home residents. Abstract from ISAZ 2013, Chicago, United States.

Strathe, A. B., Mark, T., Jensen, J., Nielsen, B., Duy, D. N. & Kadarmideen, H. N. (2013). Random regression models for daily feed intake in Danish Duroc pigs. Abstract from The American Association for Laboratory Animal Science National Meeting, Minneapolis, United States.

Sahana, G., Guldbrandtsen, B., Bendixen, C., Thomsen, B. & Lund, M. S. (2013). Genome-Wide Association Study with Sequence Variants Identifies Candidate Genes for Mastitis Resistance in Dairy Cattle. Abstract from International Plant & Animal Genome XXI , San Diego, United States. http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=11A9CF

Paina, C., Byrne, S. & Asp, T. (2013). An RNA-Seq Approach to Study Vernalization and the Induction of Flowering in Perennial Ryegrass. Abstract from International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. https://pag.confex.com/pag/xxi/webprogram/Paper5903.html

Løvendahl, P., Bjerring, M., Larsen, T., van den Bijgaard, H. & Baumgartner, C. (2013). AMS carry over testing protocal - Suggestion for ICAR. Abstract from ICAR 2013, Aarhus, Denmark.

Kjærup, R. M., Dalgaard, T. S., Norup, L. R., Sørensen, P. & Juul-Madsen, H. R. (2013). Influence of mannose-binding lectin ligands on infectious bronchitis virus vaccine responses in chickens differing in mannose-binding lectin serum levels. Abstract from COST Action FA1207 - 1st meeting, Langen, Germany.

Hamzic, E., Bed'Hom, B., Juin, H., Hawken, R., Abrahamsen, M., Elsen, J.-M., Servin, B., Pinard-van der Laan, M.-H. & Demeure, O. (2013). Investigation of immune response to Eimeria maxima in broilers. Abstract from 8th European Symposium on Poultry Genetics, Venice, Italy.

Gustavsson, F., Buitenhuis, A. J., Bertelsen, H. P., Glantz, M., Lindmark Månsson, H., Stålhammar, H., Poulsen, N. A., Larsen, L. B., Bendixen, C., Andrén, A. & Paulsson, M. (2013). Effect of casein genetic variants and composition on casein micelle size in Swedish Red. Abstract from IDF World Dairy Summit 2013, Yokohama, Japan. http://www.wds2013.com/eng/

Gustavsson, F., Buitenhuis, A. J., Bertelsen, H. P., Glantz, M., Lindmark Månsson, H., Stålhammar, H., Poulsen, N. A., Larsen, L. B., Paulsson, M. & Andrén, A. (2013). Effect of casein genetic variants on rennet-induced gelation in Swedish Red. Abstract from IDF World Dairy Summit 2013, Yokohama, Japan. http://www.wds2013.com/eng/

Gustavsson, F., Gregersen, V. R., Buitenhuis, A. J., Bertelsen, H. P., Glantz, M., Stålhammar, H., Lindmark Månsson, H., Poulsen, N. A., Larsen, L. B., Bendixen, C., Fikse, F., Andrén, A. & Paulsson, M. (2013). Investigation of rennet coagulation properties in milk from Swedish Red cows using both traditional and modern milk genomics approaches. Abstract from 10th International Symposium for Milk Genomics and Human Health, UC Davis, Californien, United States. http://milkgenomics.org/10th-international-symposium-on-milk-genomics-and-human-health/

Farrell, J. D., Byrne, S. & Asp, T. (2013). De novo Transcriptome Analysis in Perennial Ryegrass. Abstract from International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1BAEC8

Do, D. N., Strathe, A. B., Mark, T., Jensen, J. & Kadamideen, H. N. (2013). Genome wide association studies and systems genetics investigations of daily feed intake and feeding behaviour traits in three pig breeds. Abstract from Joint Conference of HGM 2013 and 21st International Congress of Genetics , Marina Bay Sands, Singapore.

Byrne, S., Paina, C., Studer, B., Panitz, F., Bendixen, C., Hentrup, S., Jensen, C. S. & Asp, T. (2013). Extent of Genome Wide Linkage Disequilibrium in a Collection of Perennial Ryegrass Forage and Turf Genotypes, and Identification of Alleles Differentiating Between Both Types. Abstract from International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1CADC8

Widyas, N., Nielsen, V. H. & Jensen, J. (2013). Potential effect of mutations in mitochondrial DNA in a selection experiment for body weight in mice. Poster session presented at Opening symposium of GenSAP, Aarhus & Foulum, Denmark. http://gensap.au.dk/7010/

Welderufael, B. G., De Koning, D.-J., Fikse, W. F., Strandberg, E., Franzén, J. & Christensen, O. F. (2013). Genetic Evaluation of Getting and Recovering from an Intramammary Infection through Longitudinal Models of Somatic Cell Count. Poster session presented at International Conference on Production Diseases in Farm Animals, Uppsala, Sweden.

Sahana, G., Guldbrandtsen, B., Bendixen, C., Thomsen, B. & Lund, M. S. (2013). Candidate causative mutations for two mastitis QTL in Holstein dairy cattle’ are presented. Poster session presented at International Plant & Animal Genome XXI , San Diego, United States.

Rovere, G. A., Ducro, B. J., Madsen, P., Norberg, E. & Van Arendonk, J. A. M. (2013). Effect of specialization on genetic parameters in sport horses. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Poulsen, N. A., Rybicka, I., Buitenhuis, A. J., Larsen, L. B. & Larsen, M. K. (2013). Natural variation of riboflavin content in bovine milk. Poster session presented at 10th International Symposium for Milk Genomics and Human Health, UC Davis, Californien, United States. http://milkgenomics.org/10th-international-symposium-on-milk-genomics-and-human-health/

Poulsen, N. A., Buitenhuis, A. J. & Larsen, L. B. (2013). The association of milk composition traits with milk coagulation properties in milk from healthy mid-lactating cows. Poster session presented at 10th International Symposium for Milk Genomics and Human Health, UC Davis, Californien, United States. http://milkgenomics.org/10th-international-symposium-on-milk-genomics-and-human-health/

Paina, C., Byrne, S. & Asp, T. (2013). An RNA-Seq Approach to Study Vernalization and the Induction of Flowering in Perennial Ryegrass. Poster session presented at International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1BAEC9

Okeno, T. O., Henryon, M. & Sørensen, A. C. (2013). Strategies to determine the necessary number of phenotyped candidates in genomic selection. Poster session presented at 64th Annual Meeting of the European Association for Animal Production, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Mao, X., Sahana, G., Koning, D. J. & Guldbrandtsen, B. (2013). Population level genome-wide association study for calving traits in Holstein cattle. Poster session presented at 64th Annual Meeting of the European Association for Animal Production, Nantes, France.

Maia, R. P., Madsen, P., Pedersen, J. & Labouriau, R. (2013). Genetic study of mortality rate in Danish dairy cows: a multivariate competing risk analysis. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Løvendahl, P., Sørensen, L. P., Bjerring, M. & Lassen, J. (2013). Genetic variation in choice consistency for cows accessing automatic milking units. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Liu, T., Qu, H., Luo, C., Lund, M. S., Su, G. & Shu, D. (2013). Accuracy of genomic prediction in Chinese triple-yellow chicken. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Henryon, M., Berg, P., Sørensen, A. C., Ostersen, T. & Nielsen, B. (2013). Most of the benefits from genomic selection can be realised by genotyping a proportion of selection candidates. Poster session presented at 62nd Annual Meeting of the European Federation of Animal Science, EAAP, Stavanger, Norway.

Hamzic, E., Bed'Hom, B., Juin, H., Hawken, R., Abrahamsen, M., Elsen, J.-M., Servin, B., Pinard-van der Laan, M.-H. & Demeure, O. (2013). Investigation of immune response to Eimeria maxima in broilers. Poster session presented at 8th European Symposium on Poultry Genetics, Venice, Italy.

Guo, X., Christensen, O. F., Ostersen, T., Sorensen, D., Wang, Y., Lund, M. S. & Su, G. (2013). Improving genetic evaluation of litter size and piglet mortality by combining marker information. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Fé, D., Greve-Pedersen , M. & Jensen, C. S. (2013). Genetic and Environmental Variance Among F2 Families in a Commercial Breeding Program for Perennial Ryegrass (Lolium perenne L.). Poster session presented at International Plant & Animal Genome XXI , San Diego, United States. http://www.intlpag.org/2013/

Farrell, J. D., Byrne, S. & Asp, T. (2013). De novo Transcriptome Analysis in Perennial Ryegrass. Poster session presented at International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. http://www.intlpag.org/2013/

Esfandyari, H., Henryon, M., Berg, P., Thomasen, J. R., Bijma, P. & Sørensen, A. C. (2013). Non-additive genetic effects can increase additive genetic variation and long-term response to selection. Poster session presented at 64th Annual Meeting of the European Association for Animal Production, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Edwards, S. M., Janss, L., Madsen, P. & Sørensen, P. (2013). Partitioning of genomic variance using biological pathways. Poster session presented at Joint 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) and 12th European Conference on Computational Biology (ECCB) 2013, Berlin, Germany. http://f1000.com/posters/browse/summary/1093874

Edwards, S. M., Janss, L., Madsen, P. & Sørensen, P. (2013). Partitioning of genomic variance using prior biological information. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Do, D. N., Ostersen, T., Strathe, A. B., Jensen, J., Mark, T. & Kadarmideen, H. (2013). Integrated GWAS and Pathway profiling for feed efficiency traits in pigs leads to novel genes and their molecular pathways. Poster session presented at 14th International Conference on Systems Biology , Copenhagen, Denmark. http://www.icsb2013.dk/images/Media/pdf/icsb2013_abstract_book_new.pdf

Byrne, S., Czaban, A. & Asp, T. (2013). Genome Wide Allele Frequency Fingerprints (GWAFFs) of Populations via Genotyping by Sequencing. Poster session presented at International Plant & Animal Genome XXI (PAG XXI), San Diego, CA, United States. http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=10A0CE

Ashraf, B., Janss, L., Jensen, J., Asp, T. & Jensen, C. S. (2013). Correction for Measurement Error from Genotyping-by-Sequencing in Genomic Variance and Genomic Prediction Models. Poster session presented at International Plant & Animal Genome XXI , San Diego, United States. http://www.intlpag.org/2013/

2013

Contribution to book anthology

Wu, X., Su, G., Sahana, G., Guldbrandtsen, B., Sun, D., Zhang, Q. & Lund, M. S. (2013). Comparison on GWAS using different models and different markers data set. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 330). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Wang, L., Sørensen, P., Janss, L., Ostersen, T. & Edwards, D. (2013). A novel method to visualize local variation of LD and persistence of phase for 3 Danish pig breeds. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 174). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Vilkki, J., Dolezal, M., Sahana, G., Bagnato, A., Tafer, H., Iso-Touru, T., Panitz, F., Santus, E. & Soller, M. (2013). Validation of QTL affecting masistis in dairy cattle. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production. 2013. (2013 ed., Vol. 19, pp. 538). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Vestergaard, M., Spleth, P., Kristensen, L. & Kargo, M. (2013). Growth and carcass quality of crossbred Jersey bull and heifer calves. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 583). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Verrier, E., Norberg, E., Lunden, A. & Komen, H. (2013). Training the future generations of animal breeders: example of EGS-ABG, a European joint PhD program. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 570). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

van den Berg, I., Fritz, S., Djari, A., Rodriguez, S. C., Esquerre, D., Klopp, C., Rochar, D. & Lund, M. S. (2013). Concordance analysis: from QTL to candidate causative mutations. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 234). Wageningen Academic Publishers.

Thomasen, J. R., Sørensen, A. C., Lund, M. S. & Guldbrandtsen, B. (2013). Genotyping cows for the reference increase reliability of genomic prediction in a small breed. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 621). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Sørensen, P., Edwards, S. M., Madsen, P., Jensen, P., Sørensen, I. F., de los Campos, G. & Sorensen, D. (2013). Genomic Feature Models. In Book of Abstracts (pp. 68) http://www.nature.com/natureconferences/gcd2013/index.html

Sorensen, D., Sørensen, P. & de los Campos, G. (2013). Genetic regulation of environmental variation in Drosophila inbred lines. In Book of Abstracts (pp. 67) http://www.nature.com/natureconferences/gcd2013/index.html

Sevón-Aimonen, M.-L., Labouriau, R., Maia, R. P., Haltia, S. & Uimari, P. (2013). Estimation of variance components of sow longevity traits using discrete time model. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 390). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Rovere, G. A., Ducro, B. J., Madsen, P., Norberg, E. & Van Arendonk, J. A. M. (2013). Effect of specialization on genetic parameters in sport horses. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (pp. 367). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Paina, C., Byrne, S. & Asp, T. (2013). An RNA-Seq approach to study vernalization and the induction of flowering in perennial ryegrass. In Plant Biotech Denmark Annual meeting 2013 (pp. 110) http://www.plant-biotech.dk/Annual_meeting.aspx

Okeno, T. O., Henryon, M. & Sørensen, A. C. (2013). Strategies to determine the necessary number of phenotyped candidates in genomic selection. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production. 2013. (2013 ed., Vol. 19, pp. 320). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Mao, X., Sahana, G., Koning, D. J. & Guldbrandtsen, B. (2013). Population level genome-wide association study for calving traits in Holstein cattle. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production. 2013. (2013 ed., Vol. 19, pp. 330). Wageningen Academic Publishers.

Maia, R. P., Madsen, P., Pedersen, J. & Labouriau, R. (2013). Genetic study of mortality rate in Danish dairy cows: a multivariate competing risk analysis. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 315). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Løvendahl, P., Sørensen, L. P., Bjerring, M. & Lassen, J. (2013). Genetic variation in choice consistency for cows accessing automatic milking units. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 301). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Liu, T., Qu, H., Luo, C., Lund, M. S., Su, G. & Shu, D. (2013). Accuracy of genomic prediction in Chinese triple-yellow chicken. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 313). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Liu, H., Sørensen, A. C., Meuwissen, T. H. E. & Berg, P. (2013). Allele frequency changes due to hitch-hicking in genomic selection programs. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (pp. 455). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Le, H. T., Lundeheim, N. & Norberg, E. (2013). Does lameness in the sow influence her reproduction. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 391). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Lassen, J., St.Pierre, B., Schmidt, R., Wright, A. D. G. & Løvendahl, P. (2013). Investigating potential interactions between methane emission and rumen microbial profiles. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 578). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Jensen, J. (2013). Joint estimation for curves for weight, feed intake, rate of gain, and residual feed intake. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 531). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

Hjortø, L., Ettema, J. F., Sørensen, A. C. & Kargo, M. (2013). Large scale genomic testing within herd does not affect contribution margin. In Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production (2013 ed., Vol. 19, pp. 621). Wageningen Academic Publishers. http://www.eaap.org/Previous_Annual_Meetings/2013Nantes/Nantes_2013_Abstracts.pdf

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Jette Odgaard Villemoes