Zhang, Q., Guldbrandtsen, B., Bosse, M.
, Lund, M. S. & Sahana, G. (2014).
Runs of homozygosity and distribution of functional variants in cattle genome. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.
https://event.crowdcompass.com/wcgalp2014#/activity/67ND0x1HWf
Zhang, Q., Calus, M. P. L., Guldbrandtsen, B.
, Lund, M. S. & Sahana, G. (2015).
Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds.
B M C Genetics,
16(88), 1-16.
https://doi.org/10.1186/s12863-015-0227-7
Zhang, Q., Guldbrandtsen, B., Bosse, M.
, Lund, M. S. & Sahana, G. (2015).
Runs of homozygosity and distribution of functional variants in cattle genome.
B M C Genomics,
16(542), 1-16.
https://doi.org/10.1186/s12864-015-1715-x
Zhang, Q., Guldbrandtsen, B.
, Thomasen, J. R., Lund, M. S. & Sahana, G. (2016).
Genome-wide association study for longevity with whole-genome sequencing in 3 cattle breeds.
Journal of Dairy Science,
99(9), 7289-7298.
https://doi.org/10.3168/jds.2015-10697
Zhang, Q., Guldbrandtsen, B., Calus, M. P. L.
, Lund, M. S. & Sahana, G. (2016).
Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships.
Genetics Selection Evolution,
48(1), Article 60.
https://doi.org/10.1186/s12711-016-0238-5
Zhang, Q., Calus, M. P. L., Guldbrandtsen, B.
, Lund, M. S. & Sahana, G. (2017).
Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle.
Genetics Selection Evolution,
49(1), Article 60.
https://doi.org/10.1186/s12711-017-0336-z
Wang, L., Janss, L. L., Madsen, P., Henshall, J., Huang, C.-H., Marois, D., Alemu, S., Sørensen, A. C.
& Jensen, J. (2020).
Effect of genomic selection and genotyping strategy on estimation of variance components in animal models using different relationship matrices.
Genetics, selection, evolution : GSE,
52(1), Article 31.
https://doi.org/10.1186/s12711-020-00550-w
Villumsen, T. M., Su, G., Cai, Z., Guldbrandtsen, B.
, Asp, T., Sahana, G. & Lund, M. S. (2018).
Genomic selection in mink yield higher accuracies with a Bayesian approach allowing for heterogeneous variance than a GBLUP model. In
Proceedings of the World Congress on Genetics Applied to Livestock Production, 2018: Volume Methods and Tools - Prediction 2 Article 11.618
http://www.wcgalp.org/proceedings/2018/genomic-selection-mink-yield-higher-accuracies-bayesian-approach-allowing
van den Berg, I., Guldbrandtsen, B., Hozé, C., Brøndum, R. F., Boichard, D. A.
& Lund, M. S. (2014).
Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.
https://event.crowdcompass.com/wcgalp2014/activity/DtbvU7eMTN
van den Berg, I., Guldbrandtsen, B., Hozé, C., Brøndum, R. F., Boichard, D. A.
& Lund, M. S. (2014).
Across Breed QTL Detection and Genomic Prediction in French and Danish Dairy Cattle Breeds. Poster session presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.
https://event.crowdcompass.com/wcgalp2014/activity/DtbvU7eMTN
van den Berg, I., Boichard, D., Guldbrandtsen, B.
& Lund, M. S. (2016).
Using Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study.
G3: Genes, Genomes, Genetics,
6(8), 2553-2561.
https://doi.org/10.1534/g3.116.027730
Uddin, M. M., Guldbrandtsen, B., Iso-Touru, T., Vilkki, J., de Koning, D.-J., Boichard, D.
, Lund, M. S. & Sahana, G. (2017).
A population scale discovery of large deletions in Holstein, Jersey and Nordic Red Cattle genome. Poster session presented at 36th International Society for Animal Genetics Conference, Dublin, Ireland.
http://www.isag.us/Docs/Proceedings/ISAG2017_Proceedings.pdf?v3
Tsai, H.-Y.
, Janss, L. L., Andersen, J. R., Orabi, J., Jensen, J. D., Jahoor, A.
& Jensen, J. (2020).
Genomic prediction and GWAS of yield, quality and disease-related traits in spring barley and winter wheat.
Scientific Reports,
10(1), Article 3347.
https://doi.org/10.1038/s41598-020-60203-2
Tessema, B. B.
, Liu, H., Sørensen, A. C., Andersen, J. R.
& Jensen, J. (2020).
Strategies Using Genomic Selection to Increase Genetic Gain in Breeding Programs for Wheat.
Frontiers in Genetics,
11, Article 578123.
https://doi.org/10.3389/fgene.2020.578123
Sverrisdóttir, E., Byrne, S., Sundmark, E. H. R., Johnsen, H. Ø., Kirk, H. G.
, Asp, T., Janss, L. & Nielsen, K. L. (2017).
Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing.
Theoretical and Applied Genetics,
130(10), 2091-2108.
https://doi.org/10.1007/s00122-017-2944-y
Sverrisdóttir, E., Sundmark, E. H. R., Johnsen, H. Ø., Kirk, H. G.
, Asp, T., Janss, L., Bryan, G. & Nielsen, K. L. (2018).
The value of expanding the training population to improve genomic selection models in tetraploid potato.
Frontiers in Plant Science,
9, Article 1118.
https://doi.org/10.3389/fpls.2018.01118
Sverrisdóttir, E.
, Janss, L., Byrne, S.
, Asp, T. & Lehmann Nielsen, K. (2016).
Initiating genomic selection in tetraploid potato. Abstract from 13th Solanaceae Conference, Davis, United States.
Sørensen, P., de los Campos, G., Morgante, F., F C Mackay, T.
& Sorensen, D. (2015).
Genetic control of environmental variation of two quantitative traits of Drosophila melanogaster revealed by whole-genome sequencing.
Genetics (Print),
201(2), 487-497.
https://doi.org/10.1534/genetics.115.180273
Sarup, P. M.
, Jensen, J., Edwards, S. M., Ostersen, T.
, Sørensen, P. & Henryon, M. A. (2014).
Separating Signal from Noise Estimating SNP-effects and Decomposing Genetic Variation to the Level of QTLs in Pure Breed Duroc Pigs. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.
https://event.crowdcompass.com/wcgalp2014/activity/8tN0Up65ZB
Sarup, P. M.
, Jensen, J., Ostersen, T., Henryon, M.
& Sørensen, P. (2016).
Increased prediction accuracy using a genomic feature model including prior information on quantitative trait locus regions in purebred Danish Duroc pigs.
BMC Genetics,
17(11), Article 11.
https://doi.org/10.1186/s12863-015-0322-9
Sahana, G., Janss, L., Guldbrandtsen, B.
& Lund, M. S. (2014).
Genetic Architecture of Milk, Fat, Protein, Mastitis and Fertility Studied using NGS Data in Holstein Cattle. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.
https://event.crowdcompass.com/wcgalp2014/activity/SPE1ZV6qCw
Sahana, G., Iso-Touru, T., Wu, X., Nielsen, U., de Koning, D.-J.
, Lund, M. S., Vilkki, J. & Guldbrandtsen, B. (2016).
A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle.
Genetics Selection Evolution,
48(1), Article 35.
https://doi.org/10.1186/s12711-016-0215-z
Rohde, P. D., Krag, K.
, Loeschcke, V., Overgaard, J., Sørensen, P. & Kristensen, T. N. (2016).
A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population.
International Journal of Genomics,
2016, 1-11. Article 2157494.
https://doi.org/10.1155/2016/2157494
Rohde, P. D., Madsen, L. S., Arvidson, S. M. N.
, Loeschcke, V., Demontis, D. & Kristensen, T. N. (2016).
Testing candidate genes for attention-deficit/hyperactivity disorder in fruit flies using a high throughput assay for complex behavior.
Fly,
10(1), 25-34. Article 1158365.
https://doi.org/10.1080/19336934.2016.1158365
Rohde, P. D.
, Demontis, D., Castro Dias Cuyabano, B.
, Børglum, A. & Sørensen, P. (2016).
Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes.
Genetics (Print),
203(4), 1901-1913.
https://doi.org/10.1534/genetics.116.189498
Rohde, P. D., Gartner, B., Ward, K.
, Sørensen, P. & F C Mackay, T. (2017).
Genomic Analysis of Genotype-by-Social Environment Interaction for Drosophila melanogaster Aggressive Behavior.
Genetics (Print),
206(4), 1969-1984.
https://doi.org/10.1534/genetics.117.200642
Rohde, P. D., Østergaard, S., Kristensen, T. N.
, Sørensen, P., Loeschcke, V., F C Mackay, T. & Sarup, P. M. (2018).
Functional validation of candidate genes detected by genomic feature models.
G3: Genes, Genomes, Genetics (Bethesda),
8(5), 1659-1668.
https://doi.org/10.1534/g3.118.200082
Ørsted, M., Rohde, P. D., Hoffmann, A. A.
, Sørensen, P. & Kristensen, T. N. (2018).
Environmental variation partitioned into separate heritable components.
Evolution,
72(1), 136-152.
https://doi.org/10.1111/evo.13391
Ørsted, M., Hoffmann, A. A., Rohde, P. D.
, Sørensen, P. & Kristensen, T. N. (2019).
Strong impact of thermal environment on the quantitative genetic basis of a key stress tolerance trait.
Heredity,
122(3), 315-325.
https://doi.org/10.1038/s41437-018-0117-7