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Publications

Peer-reviewed publications at QGG

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Zumbach, B., Madsen, P. & Holm, B. (2009). Approaches to increase piglet survical through breeding. In M. O. Fog (Ed.), Husdyrforsøgsmøtet (pp. 87-90)
Zumbach, B., Madsen, P. & Holm, B. (2009). Genetic parameters for individual piglet survival in Norsvin Landrace in 1st and 2nd parity. Poster session presented at Annual Meeting of of the European Association for Animal Production, EAAP, Barcelona, Spain.
Zink, V., Lassen, J. & Stipková, M. (2010). Genetic Parameters of Female Fertility and Udder Conformation Traits in the Czech Holstein Cattle Population. In Abracts (pp. 193). Gesellschaft für Tierzuchtwissenschaften e. V..
Zink, V., Lassen, J. & Stipková, M. (2010). Genetic Parameters of Female Fertility and Udder Conformation Traits in the Czech Holstein Cattle Population. Poster session presented at World Congress on Genetics Applied to Livestock Production, WCGALP, Leipzig, Germany.
Zink, V., Lassen, J. & Štipkova, M. (2012). Genetic parameters for female fertility and milk production traits in first-parity Czech Holstein cows. Czech Journal of Animal Science, 57(3), 108-114.
Zhukov, V. A., Borisov, A. Y., Kuznetsova, E. V., Madsen, L. H., Moffet, M. D., Ovchinnikova, E. S., Pinaev, A. G., Radutoiu, S., Rozov, S. M., Rychagova, T. S., Shtark, O. Y., Tsyganov, V. E., Voroshilova, V. A., Stougaard, J., Weeden, N. F. & Tikhonovich, I. A. (2008). GENOME SYNTENY OF PEA AND MODEL LEGUMES: FROM MUTATION THROUGH GENETIC MAPPING TO THE GENES. In FD. Dakora, SBM. Chimphango, AJ. Valentine, C. Elmerich & WE. Newton (Eds.), BIOLOGICAL NITROGEN FIXATION: TOWARDS POVERTY ALLEVIATION THROUGH SUSTAINABLE AGRICULTURE (pp. 223-224). Springer.
Zhu, Z., Kristensen, L., Poulsen, M., Lassen, J., Noel, S. J., Højberg, O. & Løvendahl, P. (2014). Dairy cow rumen fermentation characteristics at the onset of lactation. Poster session presented at Rowett-INRA 2014. Gut Microbiology: from Sequence to Function, Aberdeen, United Kingdom.
Zhu, Z., Noel, S. J., Difford, G., Al-Soud, W. A., Brejnrod, A. D., Sørensen, S. J., Lassen, J., Løvendahl, P. & Højberg, O. (2016). Community structure of rumen metabolically active bacterial and archaeal communities in dairy cows over the transition period. Poster session presented at INRA - Rowett 2016, Clermont-Ferrand, France.
Zhu, Z., Noel, S. J., Difford, G., Abu Al-Soud, W., Brejnrod, A., Sørensen, J., Lassen, J., Løvendahl, P. & Højberg, O. (2016). The community structure of rumen metabolically active bacterial and archaeal communities in dairy cows over the transition period. In Proceedings: Gut Microbiology - 20 Years & counting. 10th INRA-Rowett Symposium (pp. 92-92).
Zhu, X., Li, C., Luo, C., Bai, Z., Shu, D., Chen, P., Ren, J., Song, R., Fang, L., Qu, H., Wang, Y. & Hu, X. (2025). Mapping the regulatory genetic landscape of complex traits using a chicken advanced intercross line. Nature Communications, 16(1), Article 5841. https://doi.org/10.1038/s41467-025-60834-x
Zhu, D., Wang, Y., Qu, H., Feng, C., Zhang, H., Sheng, Z., Jiang, Y., Nie, Q., Chu, S., Shu, D., Jiang, Z., Zhang, D., Fang, L., Li, H., Xu, Z., Zhao, Y., Wang, Y. & Hu, X. (2025). GCRP: Integrated Global Chicken Reference Panel from 11,951 Chicken Genomes. Genomics, Proteomics and Bioinformatics, 23(3), Article qzaf032. https://doi.org/10.1093/gpbjnl/qzaf032
Zhou, L., Ding, X., Zhang, Q., Wang, Y., Lund, M. S. & Su, G. (2012). Genomic prediction using the combined Chinese and Nordic Holsteins reference population. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.
Zhou, L., Ding, X., Zhang, Q., Wang, Y., Lund, M. S. & Su, G. (2012). Genomic prediction using the combined Chinese and Nordic Holsteins reference population. In Programme & Book of Abstracts, ICQG2012 (pp. 150-150).
Zhou, L., Heringstad, B., Su, G., Guldbrandtsen, B., Meuwissen, T. H. E., Svendsen, M., Grove, H., Nielsen, U. S. & Lund, M. S. (2014). Genomic predictions based on a joint reference population for the Nordic Red cattle breeds. Journal of Dairy Science, 97(7), 4485-4496. https://doi.org/10.3168/jds.2013-7580
Zhou, Y., Zhang, Z., Bao, Z., Li, H., Lyu, Y., Zan, Y., Wu, Y., Cheng, L., Fang, Y., Wu, K., Zhang, J., Lyu, H., Lin, T., Gao, Q., Saha, S., Mueller, L., Fei, Z., Städler, T., Xu, S. ... Huang, S. (2022). Graph pangenome captures missing heritability and empowers tomato breeding. Nature, 606(7914), 527-534. https://doi.org/10.1038/s41586-022-04808-9
Zhou, H., Clark, E., Guan, D., Lagarrigue, S., Fang, L., Cheng, H., Tuggle, C. K., Kapoor, M., Wang, Y., Giuffra, E. & Egidy, G. (2025). Comparative Genomics and Epigenomics of Transcriptional Regulation. Annual Review of Animal Biosciences, 13(1), 73-98. https://doi.org/10.1146/annurev-animal-111523-102217
Zhou, J., Xu, L., Liu, Q., Ma, J., He, J., Casey, D. S., Zhong, L., Su, G., Huang, R., Li, P. & Zhao, Q. (2025). Genetic parameters of vulva traits and impact of vulva scores on gilts culling in Large White pigs. ANIMAL, 19(4), Article 101472. https://doi.org/10.1016/j.animal.2025.101472
Zhong, C., Li, X., Guan, D., Zhang, B., Wang, X., Qu, L., Zhou, H., Fang, L., Sun, C., Yang, N. & ChickenGTEx Consortium (2024). Age-dependent genetic architectures of chicken body weight explored by multidimensional GWAS and molQTL analyses. Journal of Genetics and Genomics, 51(12), 1423-1434. https://doi.org/10.1016/j.jgg.2024.09.003
Zheng, S. L., Henry, A., Cannie, D., Lee, M., Miller, D., McGurk, K. A., Bond, I., Xu, X., Issa, H., Francis, C., De Marvao, A., Theotokis, P. I., Buchan, R. J., Speed, D., Abner, E., Adams, L., Aragam, K. G., Ärnlöv, J., Raja, A. A. ... COVIDsortium (2024). Genome-wide association analysis provides insights into the molecular etiology of dilated cardiomyopathy. Nature Genetics, 56(12), 2646-2658. Article 2254. https://doi.org/10.1038/s41588-024-01952-y
Zhao, P., Peng, C., Fang, L., Wang, Z. & Liu, G. E. (2023). Taming transposable elements in livestock and poultry: a review of their roles and applications. Genetics Selection Evolution, 55(1), Article 50. https://doi.org/10.1186/s12711-023-00821-2
Zhao, P., Gu, L., Gao, Y., Pan, Z., Liu, L., Li, X., Zhou, H., Yu, D., Han, X., Qian, L., Liu, G. E., Fang, L. & Wang, Z. (2023). Young SINEs in pig genomes impact gene regulation, genetic diversity, and complex traits. Communications Biology, 6(1), Article 894. https://doi.org/10.1038/s42003-023-05234-x
Zhao, F., Xie, R., Fang, L., Xiang, R., Yuan, Z., Liu, Y. & Wang, L. (2024). Analysis of 206 whole-genome resequencing reveals selection signatures associated with breed-specific traits in Hu sheep. Evolutionary Applications, 17(6), Article e13697. https://doi.org/10.1111/eva.13697
Zhang, Y.-H., Li, J., Pedersen, A. M., Villemoes, K., Schmidt, M. E., Bøgh, I. B., Purup, S., Bolund, L., Jørgensen, A. L., Yang, H., Li, N. & Vajta, G. (2007). Birth of cloned piglets derived from an optimized in vitro blastocyst production system by Trichostatin A treatment. In Proceedings of the Annual Conference of the International Embryo Transfer Society, IETS (pp. 168) https://doi.org/10.1071/RDv19n1Ab103
Zhang, Q., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2014). Inbreeding, admixture and selection signature in Danish Cattle breeds. Poster session presented at 34th International Society for Animal Genetics Conference, Xi'an, China.
Zhang, Q., Guldbrandtsen, B., Bosse, M., Lund, M. S. & Sahana, G. (2014). Runs of homozygosity and distribution of functional variants in cattle genome. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada. https://event.crowdcompass.com/wcgalp2014#/activity/67ND0x1HWf
Zhang, H., Xu, W., Li, X., Luo, H., Liu, A. & Wang, Y. (2018). Genetic analysis of skinfold thickness and its association with body condition score, and milk production traits in Chinese Holstein population. Abstract from ICAR Conference and World Congress on Genetics Applied to Livestock Production 2018, Auckland, New Zealand.
Zhang, Z., Zhang, Q., Xiao, Q., Sun, H., Gao, H., Yang, Y., Chen, J., Li, Z., Xue, M., Ma, P., Yang, H., Xu, N., Wang, Q. & Pan, Y. (2018). Distribution of runs of homozygosity in Chinese and Western pig breeds evaluated by reduced-representation sequencing data. Animal Genetics, 49(6), 579-591. https://doi.org/10.1111/age.12730
Zhang, T., Gao, H., Sahana, G., Zan, Y., Fan, H., Liu, J., Shi, L., Liu, J., Du, L., Wang, L. & Zhao, F. (2019). Genome-wide association studies revealed candidate genes for tail fat deposition and body size in the Hulun Buir sheep. Journal of Animal Breeding and Genetics, 136(5), 362-370. https://doi.org/10.1111/jbg.12402
Zhang, Y., Ran, Y., Nagy, I., Lenk, I., Qiu, J. L., Asp, T., Jensen, C. S. & Gao, C. (2020). Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system. Plant Biotechnology Journal, 18(9), 1854-1856. https://doi.org/10.1111/pbi.13359
Zhang, H., Wang, K., An, T., Zhu, L., Chang, Y., Lou, W., Liu, L., Guo, G., Liu, A., Su, G., Brito, L. F. & Wang, Y. (2022). Genetic parameters for dairy calf and replacement heifer wellness traits and their association with cow longevity and health indicators in Holstein cattle. Journal of Dairy Science, 105(8), 6749-6759. https://doi.org/10.3168/jds.2021-21450
The FarmGTEx Consortium (2025). FarmGTEx TWAS-server: An Interactive Web Server for Customized TWAS Analysis. Genomics, Proteomics and Bioinformatics, 23(1), Article qzaf006. https://doi.org/10.1093/gpbjnl/qzaf006
Zhan, B., Andersen, P. K., Hedegaard, J., Bendixen, C. & Panitz, F. (2009). Comparison of assembly strategies for high throughput de novo sequencing of bacterial genomes: Poster U45. Poster session presented at ISMB/ECCB 2009 - Seventeenth Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) / Eighth Annual European Conference on Computational Biology (ECCB), Stockholm, Sweden.
Zhan, B., Hedegaard, J., Bendixen, C. & Panitz, F. (2010). Analysis of global variation in pig: Discovery of novel SNPs by whole genome re-sequencing. Poster session presented at Conference of the International Society for Animal Genetics, ISAG 2010, Edinburgh, United Kingdom.
Zetouni, L., Sørensen, A. C., Henryon, M. & Lassen, J. (2015). Direct multitrait selection gives the highest genetic response in a ratio trait. In Book of Abstracts of the 66th Annual Meeting of the European Federation of Animal Science (Vol. 21, pp. 288-288). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-816-2
Zetouni, L., Kargo, M. & Lassen, J. (2016). Fertility and health traits correlations with methane emissions. In Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-830-8
Zeng, H., Zhang, W., Lin, Q., Gao, Y., Teng, J., Xu, Z., Cai, X., Zhong, Z., Wu, J., Liu, Y., Diao, S., Wei, C., Gong, W., Pan, X., Li, Z., Huang, X., Chen, X., Du, J., Zhao, F. ... PigGTEx Consortium (2024). PigBiobank: a valuable resource for understanding genetic and biological mechanisms of diverse complex traits in pigs. Nucleic Acids Research, 52(D1), D980-D989. https://doi.org/10.1093/nar/gkad1080
Zangenberg, M., Hansen, H. B., Jørgensen, J. R. & Hellgren, L. I. (2004). Cultivar and Year-to-Year Variation of Phytosterol Content in Rye (Secale cereale L.). Journal of Agricultural and Food Chemistry, 52(9), 2593-2597. https://doi.org/10.1021/jf0351873
Zan, Y., Chen, S., Ren, M., Liu, G., Liu, Y., Han, Y., Dong, Y., Zhang, Y., Si, H., Liu, Z., Liu, D., Zhang, X., Tong, Y., Li, Y., Jiang, C., Wen, L., Xiao, Z., Sun, Y., Geng, R. ... Yang, A. (2025). The genome and GeneBank genomics of allotetraploid Nicotiana tabacum provide insights into genome evolution and complex trait regulation. Nature Genetics, 57(4), 986-996. Article 3833. https://doi.org/10.1038/s41588-025-02126-0
Zambonelli, P., Davoli, R., Fontanesi, L., Stella, A., Hedegaard, J., Hornshøj, H., Nanni Costa, L. & Russo, V. (2008). Gene expression studies to identify skeletal muscle genes related to stress in pigs. Poster session presented at SABRE Conference: Welfare and Quality Genomics, Foulum, Denmark.
Zaman, M. A., Sørensen, P. & Howlider, M. A. R. (2004). Egg production performances of a breed and three crossbreeds under semi-scavenging system of management. In Books of Abstracts: CD communication P5-12 (pp. 907)
Zaman, M. A., Sorensen, P. & Howlider, M. A. R. (2006). Effect of hen's age on quality characteristics of egg under semi-scavenging system. In Book of Abstracts, volume 62, supplement (pp. 526)
Zagrobelny, M., Bak, S., Rasmussen, A. V., Jørgensen, B., Naumann, C. M. & Møller, B. L. (2004). Cyanogenic glucosides and plant-insect interactions. Phytochemistry, 65(3), 293-306. https://doi.org/10.1016/j.phytochem.2003.10.016
Zaalberg, R. M., Shetty, N., Janss, L. & Buitenhuis, A. J. (2018). Genetic analysis of Fourier transform infrared milk spectra for Danish Holstein and Danish Jersey. 302. Abstract from The 11th World Congress on Genetics Applied to Livestock Production , Auckland, New Zealand.
Zaalberg, R. M., Chu, T. T., Villumsen, T. M. & Jensen, J. (2021). Genetic parameters for birth weight and litter size in Danish organic pigs. In Book of Abstracts of the 72nd Annual Meeting of the European Federation of Animal Science (Vol. 27). Wageningen Academic Publicers. https://doi.org/10.3920/978-90-8686-918-3