Publications

Peer-reviewed publications at QGG

2021

Kargo, M. & Nielsen, V. H., (2021). Vurdering af racespecifikke krav til Jysk Kvæg, No. 2021-0203800, 11 p., Jun 23, 2021. Rådgivningsnotat fra DCA – National Center for Fødevarer og Jordbrug

2021

Contribution to conference

Olijhoek, D., Hellwing, A. L. F., Lund, P., Weisbjerg, M. R., Løvendahl, P. & Børsting, C. F. (2021). Enteric methane emission of Holstein and Jersey dairy cows at high dietary concentrate proportions. Poster session presented at Meeting in iClimate.

2021

Contribution to book anthology

Johansen, K., Hein, L., Spleth, P., Vestergaard, M., Nielsen, H. M. & Kargo, M. (2021). Comparing growth and feed intake in pure- and crossbred heifers fed different energy concentrations. In E. Strandberg, L. Pinotti, S. Messori, D. Kenny, M. Lee, J. F. Hocquette, V. A. P. Cadavez, S. Millet, R. Evans, T. Veldkamp, M. Pastell & G. Pollott (Eds.), Book of Abstracts of the 72nd Annual Meeting of the European Federation of Animal Science (pp. 521). Wageningen Academic Publishers. EAAP Book of Abstracts Vol. 27 https://doi.org/10.3920/978-90-8686-918-3

2021

Contribution to journal

Jensen, J. (2021). Word of thanks to Professor Miguel-Pérez Enciso. Journal of Animal Breeding and Genetics, 138(3), 277-277. https://doi.org/10.1111/jbg.12548

Gautason, E., Sahana, G., Su, G., Benjamínsson, B. H., Jóhannesson, G. & Guldbrandtsen, B. (2021). Erratum to: Short communication: investigation of the feasibility of genomic selection in Icelandic Cattle. Journal of Animal Science, 99(8), [skab234]. https://doi.org/10.1093/jas/skab234

Mohammadabadi, M., Bordbar, F., Jensen, J., Du, M. & Guo, W. (2021). Key genes regulating skeletal muscle development and growth in farm animals. Animals, 11(3), [835]. https://doi.org/10.3390/ani11030835

Hao, D., Bai, J., Du, J., Wu, X., Thomsen, B., Gao, H., Su, G. & Wang, X. (2021). Overview of metabolomic analysis and the integration with multi-omics for economic traits in cattle. Metabolites, 11(11), [753]. https://doi.org/10.3390/metabo11110753

Hartfield, M., Poulsen, N. A., Guldbrandtsen, B. & Bataillon, T. (2021). Using singleton densities to detect recent selection in Bos taurus. Evolution Letters, 5(6), 595-606. https://doi.org/10.1002/evl3.263

Zhu, Z., Difford, G., Noel, S. J., Lassen, J., Løvendahl, P. & Hojberg, O. (2021). Stability Assessment of the Rumen Bacterial and Archaeal Communities in Dairy Cows Within a Single Lactation and Its Association With Host Phenotype. Frontiers in Microbiology, 12, [636223]. https://doi.org/10.3389/fmicb.2021.636223

Zhao, Q., Liu, H., Qadri, Q. R., Wang, Q., Pan, Y. & Su, G. (2021). Long-term impact of conventional and optimal contribution conservation methods on genetic diversity and genetic gain in local pig breeds. Heredity, 127(6), 546-553. https://doi.org/10.1038/s41437-021-00484-z

Zhang, H., Liu, A., Wang, Y., Luo, H., Yan, X., Guo, X., Li, X., Liu, L. & Su, G. (2021). Genetic Parameters and Genome-Wide Association Studies of Eight Longevity Traits Representing Either Full or Partial Lifespan in Chinese Holsteins. Frontiers in Genetics, 12, [634986]. https://doi.org/10.3389/fgene.2021.634986/full

Zaalberg, R. M., Poulsen, N. A., Bovenhuis, H., Sehested, J., Larsen, L. B. & Buitenhuis, A. J. (2021). Genetic analysis on infrared-predicted milk minerals for Danish dairy cattle. Journal of Dairy Science, 104(8), 8947-8958. https://doi.org/10.3168/jds.2020-19638

Villumsen, T. M., Su, G., Guldbrandtsen, B., Asp, T. & Lund, M. S. (2021). Genomic selection in American mink (Neovison vison) using a single-step genomic best linear unbiased prediction model for size and quality traits graded on live mink. Journal of Animal Science, 99(1), [skab003]. https://doi.org/10.1093/jas/skab003

Stephansen, R. B., Lassen, J., Ettema, J. F., Sørensen, L. P. & Kargo, M. (2021). Economic value of residual feed intake in dairy cattle breeding goals. Livestock Science, 253, [104696]. https://doi.org/10.1016/j.livsci.2021.104696

Slagboom, M., Sørensen, A. C., Thomasen, J. R., Liu, H., Kargo, M. & Hjortø, L. (2021). Ignoring genotype by environment interaction in the genetic evaluation of dairy cattle reduces accuracy but may increase selection intensity. Journal of Dairy Science, 104(12), 12756-12764. https://doi.org/10.3168/jds.2021-20876, https://doi.org/10.3168/jds.2021-20876

Shi, S., Li, X., Fang, L., Liu, A., Su, G., Zhang, Y., Luobu, B., Ding, X. & Zhang, S. (2021). Genomic Prediction Using Bayesian Regression Models With Global-Local Prior. Frontiers in Genetics, 12, [628205]. https://doi.org/10.3389/fgene.2021.628205

Schmidtmann, C., Schönherz, A., Guldbrandtsen, B., Marjanovic, J., Calus, M., Hinrichs, D. & Thaller, G. (2021). Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe. Genetics Selection Evolution, 53(1), [23]. https://doi.org/10.1186/s12711-021-00613-6

Schmidtmann, C., Thaller, G., Kargo, M., Hinrichs, D. & Ettema, J. (2021). Derivation of economic values for German dairy breeds by means of a bio-economic model—with special emphasis on functional traits. Journal of Dairy Science, 104(3), 3144-3157. https://doi.org/10.3168/jds.2019-17635

Salimiyekta, Y., Vaez‐torshizi, R., Abbasi, M. A., Emmamjome‐kashan, N., Amin‐afshar, M., Guo, X. & Jensen, J. (2021). Random regression model for genetic evaluation and early selection in the iranian holstein population. Animals, 11(12), [3492]. https://doi.org/10.3390/ani11123492

Rome, H. J. S., Chu, T. T., Marois, D., Huang, C-H., Madsen, P. & Jensen, J. (2021). Accounting for genetic architecture for body weight improves accuracy of predicting breeding values in a commercial line of broilers. Journal of Animal Breeding and Genetics, 138(5), [528-540]. https://doi.org/10.1111/jbg.12546

Rohde, P. D., Nyegaard, M., Kjolby, M. & Sørensen, P. (2021). Multi-Trait Genomic Risk Stratification for Type 2 Diabetes. Frontiers in Medicine, 8, [711208]. https://doi.org/10.3389/fmed.2021.711208

Rohde, P. D., Kristensen, T. N., Sarup, P., Muñoz, J. & Malmendal, A. (2021). Prediction of complex phenotypes using the Drosophila melanogaster metabolome. Heredity, 126(5), 717-732. https://doi.org/10.1038/s41437-021-00404-1

Pan, Z., Yao, Y., Yin, H., Cai, Z., Wang, Y., Bai, L., Kern, C., Halstead, M., Chanthavixay, G., Trakooljul, N., Wimmers, K., Sahana, G., Su, G., Lund, M. S., Fredholm, M., Karlskov-Mortensen, P., Ernst, C. W., Ross, P., Tuggle, C. K. ... Zhou, H. (2021). Pig genome functional annotation enhances the biological interpretation of complex traits and human disease. Nature Communications, 12(1), [5848]. https://doi.org/10.1038/s41467-021-26153-7

Milkevych, V., Karaman, E., Sahana, G., Janss, L., Cai, Z. & Lund, M. S. (2021). MeSCoT: The tool for quantitative trait simulation through the mechanistic modeling of genes' regulatory interactions. G3 (Bethesda, Md.), 11(7), [jkab133]. https://doi.org/10.1093/g3journal/jkab133

Milkevych, V., Madsen, P., Gao, H. & Jensen, J. (2021). The relative effect of genomic information on efficiency of Bayesian analysis of the mixed linear model with unknown variance. Journal of Animal Breeding and Genetics (Online), 138(1), 14-22. https://doi.org/10.1111/jbg.12497

Mei, Q., Fu, C., Sahana, G., Chen, Y., Yin, L., Miao, Y., Zhao, S. & Xiang, T. (2021). Identification of new semen trait-related candidate genes in Duroc boars through genome-wide association and weighted gene co-expression network analyses. Journal of Animal Science, 99(7), [skab188]. https://doi.org/10.1093/jas/skab188

Manzanilla Pech, C. I. V., Løvendahl, P., Mansan Gordo, D. G., Difford, G., Pryce, J., Schenkel, F. S., Wegmann, S., Miglior, F., Chud, T. C. S., Moate, P. J., Williams, S. R. O., Richardson, C. M., Stothard, P. & Lassen, J. (2021). Breeding for reduced methane emission and feed-efficient Holstein cows: An international response. Journal of Dairy Science, 104(8), 8983-9001. https://doi.org/10.3168/jds.2020-19889

Macedo, F. L., Christensen, O. F. & Legarra, A. (2021). Selection and drift reduce genetic variation for milk yield in Manech Tête Rousse dairy sheep. Journal of Dairy Science, 31-34. https://doi.org/10.3168/jdsc.2020-0010

Ma, X., Christensen, O. F., Gao, H., Huang, R., Nielsen, B., Madsen, P., Jensen, J., Ostersen, T., Li, P., Shirali, M. & Su, G. (2021). Prediction of breeding values for group-recorded traits including genomic information and an individually recorded correlated trait. Heredity, 126(1), 206-217. https://doi.org/10.1038/s41437-020-0339-3

Luo, H., Brito, L. F., Li, X., Su, G., Dou, J., Xu, W., Yan, X., Zhang, H., Guo, G., Liu, L. & Wang, Y. (2021). Genetic parameters for rectal temperature, respiration rate, and drooling score in Holstein cattle and their relationships with various fertility, production, body conformation, and health traits. Journal of Dairy Science, 104(4), 4390-4403. https://doi.org/10.3168/jds.2020-19192

Laursen, S. F., Hansen, L. S., Bahrndorff, S., Nielsen, H. M., Noer, N. K., Renault, D., Sahana, G., Sørensen, J. G. & Kristensen, T. N. (2021). Contrasting Manual and Automated Assessment of Thermal Stress Responses and Larval Body Size in Black Soldier Flies and Houseflies. Insects, 12(5), [380]. https://doi.org/10.3390/insects12050380

Kargo, M., Clasen, J. B., Nielsen, H. M., Byskov, K. & Norberg, E. (2021). Heterosis and breed effects for milk production and udder health traits in crosses between Danish Holstein, Danish Red, and Danish Jersey. Journal of Dairy Science, 104(1), 678-682. https://doi.org/10.3168/jds.2019-17866

Karaman, E., Su, G., Croue, I. & Lund, M. S. (2021). Genomic prediction using a reference population of multiple pure breeds and admixed individuals. Genetics Selection Evolution, 53, [46]. https://doi.org/10.1186/s12711-021-00637-y

Houlahan, K., Schenkel, F. S., Hailemariam, D., Lassen, J., Kargo, M., Cole, J. B., Connor, E. E., Wegmann, S., Oliveira, G. A., Miglior, F., Fleming, A., Chud, T. C. S. & Baes, C. F. (2021). Effects of incorporating dry matter intake and residual feed intake into a selection index for dairy cattle using deterministic modeling. Animals, 11(4), [1157]. https://doi.org/10.3390/ani11041157

Hjortø, L., Henryon, M., Liu, H., Berg, P., Thomasen, J. R. & Sørensen, A. C. (2021). Pre-selection against a lethal recessive allele in breeding schemes with optimum-contribution selection or truncation selection. Genetics Selection Evolution, 53, [75]. https://doi.org/10.1186/s12711-021-00669-4

Handegård, K. W., Madsen, P., Storengen, L. M. & Lingaas, F. (2021). Genetic parameters for noise reactivity in standard poodles. Journal of Veterinary Behavior, 45, 33-36. https://doi.org/10.1016/j.jveb.2021.06.005

Gebreyesus, G., Lund, M. S., Kupisiewicz, K. & Su, G. (2021). Genetic parameters of semen quality traits and genetic correlations with service sire nonreturn rate in Nordic Holstein bulls. Journal of Dairy Science, 104(9), 10010-10019. https://doi.org/10.3168/jds.2021-20403

Gebreyesus, G., Lund, M. S., Sahana, G. & Su, G. (2021). Reliabilities of Genomic Prediction for Young Stock Survival Traits Using 54K SNP Chip Augmented With Additional Single-Nucleotide Polymorphisms Selected From Imputed Whole-Genome Sequencing Data. Frontiers in Genetics, 12, [667300]. https://doi.org/10.3389/fgene.2021.667300

Gebreyesus, G., Poulsen, N. A., Larsen, M. K., Larsen, L. B., Sørensen, E. S., Würtz Heegaard, C. & Buitenhuis, A. J. (2021). Vitamin B12 and transcobalamin in bovine milk: Genetic variation and genome-wide association with loci along the genome. JDS Communications , 2(3), 127-131. https://doi.org/10.3168/jdsc.2020-0048

Gautason, E., Schönherz, A. A., Sahana, G. & Guldbrandtsen, B. (2021). Genomic inbreeding and selection signatures in the local dairy breed Icelandic Cattle. Animal Genetics, 52(3), 251-262. https://doi.org/10.1111/age.13058

Gautason, E., Sahana, G., Su, G., Benjamínsson, B. H., Jóhannesson, G. & Guldbrandtsen, B. (2021). Short Communication: Investigation of the feasibility of genomic selection in Icelandic Cattle. Journal of Animal Science, 99(7), [skab139]. https://doi.org/10.1093/jas/skab139

Gao, H., Su, G., Jensen, J., Madsen, P., Christensen, O. F., Ask, B., Poulsen, B. G., Ostersen, T. & Nielsen, B. (2021). Genetic parameters and genomic prediction for feed intake recorded at the group and individual level in different production systems for growing pigs. Genetics Selection Evolution, 53(1), [33]. https://doi.org/10.1186/s12711-021-00624-3

Fu, C., Ostersen, T., Christensen, O. F. & Xiang, T. (2021). Single-step genomic evaluation with metafounders for feed conversion ratio and average daily gain in Danish Landrace and Yorkshire pigs. Genetics Selection Evolution, 53(1), 79. [79]. https://doi.org/10.1186/s12711-021-00670-x

Eydivandi, S., Roudbar, M. A., Ardestani, S. S., Momen, M. & Sahana, G. (2021). A selection signatures study among Middle Eastern and European sheep breeds. Journal of Animal Breeding and Genetics, 138(5), 574-588. https://doi.org/10.1111/jbg.12536

Eydivandi, S., Roudbar, M. A., Karimi, M. O. & Sahana, G. (2021). Genomic scans for selective sweeps through haplotype homozygosity and allelic fixation in 14 indigenous sheep breeds from Middle East and South Asia. Scientific Reports, 11, [2834]. https://doi.org/10.1038/s41598-021-82625-2

Esfandyari, H. & Jensen, J. (2021). Simultaneous Bayesian estimation of genetic parameters for curves of weight, feed intake, and residual feed intake in beef cattle. Journal of Animal Science, 99(9). https://doi.org/10.1093/jas/skab231

Eiríksson, J. H., Karaman, E., Su, G. & Christensen, O. F. (2021). Breed of origin of alleles and genomic predictions for crossbred dairy cows. Genetics Selection Evolution, 53, [84]. https://doi.org/10.1186/s12711-021-00678-3

Clasen, J. B., Kargo, M., Fikse, W. F., Strandberg, E., Wallenbeck, A., Østergaard, S. & Rydhmer, L. (2021). Conservation of a native dairy cattle breed through terminal crossbreeding with commercial dairy breeds. Acta Agriculturae Scandinavica A: Animal Sciences, 70(1). https://doi.org/10.1080/09064702.2020.1867632

Clasen, J. B., Kargo, M., Østergaard, S., Fikse, W. F., Rydhmer, L. & Strandberg, E. (2021). Genetic consequences of terminal crossbreeding, genomic test, sexed semen, and beef semen in dairy herds. Journal of Dairy Science, 104(7), 8062-8075. https://doi.org/10.3168/jds.2020-20028

Chu, T. T., Henryon, M., Jensen, J., Ask, B. & Christensen, O. F. (2021). Statistical model and testing designs to increase response to selection with constrained inbreeding in genomic breeding programs for pigs affected by social genetic effects. Genetics Selection Evolution, 53(1), [1]. https://doi.org/10.1186/s12711-020-00598-8

Christensen, B., Zachariae, E. D., Poulsen, N. A., Buitenhuis, A. J., Larsen, L. B. & Sørensen, E. S. (2021). Factors influencing milk osteopontin concentration based on measurements from Danish Holstein cows. Journal of Dairy Research, 88(1), 89 - 94. https://doi.org/10.1017/S0022029921000054

Christensen, O. F., Börner, V., Varona, L. & Legarra, A. (2021). Genetic evaluation including intermediate omics features. Genetics, 219(2), [iyab130]. https://doi.org/10.1093/genetics/iyab130

Cao, L., Mulder, H. A., Liu, H., Nielsen, H. M. & S⊘rensen, A. C. (2021). Competitive gene flow does not necessarily maximize the genetic gain of genomic breeding programs in the presence of genotype-by-environment interaction. Journal of Dairy Science, 104(7), 8122-8134. https://doi.org/10.3168/jds.2020-19823

Bellamy, K. K. L., Lingaas, F. & Madsen, P. (2021). Heritability of distichiasis in Havanese dogs in Norway. Canine medicine and genetics, 8(1), [11]. https://doi.org/10.1186/s40575-021-00110-5

Atrian-Afiani, F., Gao, H., Joezy-Shekalgorabi, S., Madsen, P., Aminafshar, M., Ali, S. & Jensen, J. (2021). Genotype by climate zone interactions for fertility, somatic cell score, and production in Iranian Holsteins. Journal of Dairy Science, 104(12), 12994-13007. https://doi.org/10.3168/jds.2020-20084, https://doi.org/10.3168/jds.2020-20084

Ask, B., Pedersen, L. V., Christensen, O. F., Nielsen, H. M., Turner, S. P. & Nielsen, B. (2021). Selection for social genetic effects in purebreds increases growth in crossbreds. Genetics, selection, evolution : GSE, 53, [15]. https://doi.org/10.1186/s12711-021-00609-2

Afiani, F. A., Joezy-Shekalgorabi, S., Amin-Afshar, M., Sadeghi, A-A. & Jensen, J. (2021). Additive genetic and permanent environmental correlation between different parts of lactation in moderate and cold regions. Czech Journal of Animal Science, 66(4), 112-121. https://doi.org/10.17221/254/2020-CJAS

2020

Hutchings, N., Lærke, P. E., Munkholm, L. J., Elsgaard, L., Kristensen, T., Rasmussen, J., Lund, P., Børsting, C. F., Løvendahl, P., Mikkelsen, M. H., Albrektsen, R., Gyldenkærne, S., Møller, H. B., Hansen, M. J., Feilberg, A. & Adamsen, A. P. S., (2020). Opdatering af effekter og potentialer af klimavirkemidler til anvendelse i landbrug, No. 2019-0035910, 23 p., Mar 02, 2020.

2020

Contribution to conference

Zaalberg, R. M., Bovenhuis, H., Poulsen, N. A., Larsen, L. B., Sehested, J. & Buitenhuis, A. J. (2020). Genetic analysis on minerals predicted with Fourier transform infrared milk spectra for two Danish dairy cattle breeds. Abstract from 71st Annual Meeting of European Federation of Animal Science. https://www.wageningenacademic.com/doi/book/10.3920/978-90-8686-900-8

Sarup, P., Guo, X., Nielsen, N., Jensen, J. D., Mulder, F., Jihad, O., Edriss, V., Jahoor, A. & Jensen, J. (2020). Using NMR metabolomics in breeding for malt quality in spring barley. Abstract from International Symposium of the Society for Plant Breeding (GPZ), Tulln, Austria. https://gpz2020.boku.ac.at/wp-content/uploads/2020/03/06_Sarup.pdf

Rome, H. J. S., Marois, D., Huang, C-H. & Jensen, J. (2020). Modeling maternal effects in later traits in broilers. Abstract from 71st Annual Meeting of European Federation of Animal Science.

Mesbah-Uddin, M., Guldbrandtsen, B., Capitan, A., Lund, M. S., Boichard, D. & Sahana, G. (2020). Strategy to imputation of large genomic deletions and utilizing them in mapping and genomic prediction in cattle. Abstract from 6th International Conference of Quantitative Genetics, Brisbane, Australia. https://icqg6.org/wp-content/uploads/2020/11/ICQG6_2020_Abstract_Book.pdf

Manzanilla Pech, C. I. V., Mansan Gordo, D. G., Løvendahl, P. & Lassen, J. (2020). Genome wide association study of methane traits in Danish Holstein. Abstract from 6th International Conference of Quantitative Genetics, Brisbane, Australia. https://icqg6.org/wp-content/uploads/2020/11/ICQG6_2020_Abstract_Book.pdf

Karaman, E., Su, G., Croue, I. & Lund, M. S. (2020). Genomic prediction using a multi-breed reference data of purebred and admixed populations. Abstract from 6th International Conference of Quantitative Genetics, Brisbane, Australia.

Karaman, E., Su, G., Croue, I. & Lund, M. S. (2020). Genomic prediction using data from multiple pure breeds and crossbreds. Abstract from 71st Annual Meeting of European Federation of Animal Science.

Eiriksson, J. H., Karaman, E., Su, G. & Christensen, O. F. (2020). Genomic prediction for crossbred cows by combining marker effects estimated in purebreds. Abstract from 71st Annual Meeting of European Federation of Animal Science. https://www.wageningenacademic.com/doi/book/10.3920/978-90-8686-900-8

Christensen, O. F., Börner, V., Varona, L. & Legarra, A. (2020). Genetic evaluation including an intermediate omics trait. Abstract from 71st Annual Meeting of European Federation of Animal Science. https://www.wageningenacademic.com/doi/book/10.3920/978-90-8686-900-8

2020

Contribution to book anthology

Vestergaard, M., Spleth, P., Stephansen, R., Kargo, M., Ettema, J. F. & Fogh, A. (2020). Utilizing beef x dairy crossbreds for beef production – Danish experiences. In Book of Abstracts of the 71st Annual Meeting of the European Federation of Animal Science (Vol. 26, pp. 317). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-900-8

2020

Book anthology

Su, G., Höglund, J., Christensen, O. F. & Lund, M. S. (2020). Possibilities for genetic improvement of pig survival until slaughter. DCA - Nationalt Center for Fødevarer og Jordbrug.

2020

Contribution to journal

Karaman, E., Lund, M. S. & Su, G. (2020). Correction: Multi-trait single-step genomic prediction accounting for heterogeneous (co)variances over the genome . Heredity, 124(4), 618. https://doi.org/10.1038/s41437-020-0299-7

Christensen, O. F., Nielsen, B., Su, G., Xiang, T., Madsen, P., Ostersen, T., Velander, I. & Strathe, A. B. (2020). Correction to: A bivariate genomic model with additive, dominance and inbreeding depression effects for sire line and three-way crossbred pigs. Genetics, selection, evolution : GSE, 52(1), [23]. https://doi.org/10.1186/s12711-020-00541-x

Rohde, P. D. & Kristensen, T. N. (2020). Untangling the genetic basis of drug response. Pharmacogenomics, 21(2), 87-89. https://doi.org/10.2217/pgs-2019-0155

Jensen, J. (2020). Carrying the torch of the Journal of Animal Breeding and Genetics forward. Journal of Animal Breeding and Genetics, 137(1), 1-2. https://doi.org/10.1111/jbg.12462

Zhang, Q., Difford, G., Sahana, G., Løvendahl, P., Lassen, J., Lund, M. S., Guldbrandtsen, B. & Janss, L. (2020). Bayesian modeling reveals host genetics associated with rumen microbiota jointly influence methane emission in dairy cows. The ISME Journal, 14(8), 2019-2033. https://doi.org/10.1038/s41396-020-0663-x

Zhang, Q., Cai, Z., Lhomme, M., Sahana, G., Lesnik, P., Guerin, M., Fredholm, M. & Karlskov-Mortensen, P. (2020). Inclusion of endophenotypes in a standard GWAS facilitate a detailed mechanistic understanding of genetic elements that control blood lipid levels. Scientific Reports, 10(1), [18434]. https://doi.org/10.1038/s41598-020-75612-6

Zaalberg, R. M., Buitenhuis, A. J., Sundekilde, U. K., Poulsen, N. A. & Bovenhuis, H. (2020). Genetic analysis of orotic acid predicted with Fourier transform infrared milk spectra. Journal of Dairy Science, 103(4), 3334-3348. https://doi.org/10.3168/jds.2018-16057

Zaalberg, R. M., Janss, L. & Buitenhuis, A. J. (2020). Genome-wide association study on Fourier transform infrared milk spectra for two Danish dairy cattle breeds. BMC Genetics, 21(1), [9]. https://doi.org/10.1186/s12863-020-0810-4

Wu, X., Mesbah-Uddin, M., Guldbrandtsen, B., Lund, M. S. & Sahana, G. (2020). Novel haplotypes responsible for prenatal death in Nordic Red and Danish Jersey cattle. Journal of Dairy Science, 103(5), 4570-4578. https://doi.org/10.3168/jds.2019-17831

Wang, X., Su, G., Hao, D., Lund, M. S. & Kadarmideen, H. N. (2020). Comparisons of improved genomic predictions generated by different imputation methods for genotyping by sequencing data in livestock populations. Journal of Animal Science and Biotechnology, 11(1), [3]. https://doi.org/10.1186/s40104-019-0407-9

Wang, L., Janss, L. L., Madsen, P., Henshall, J., Huang, C-H., Marois, D., Alemu, S., Sørensen, A. C. & Jensen, J. (2020). Effect of genomic selection and genotyping strategy on estimation of variance components in animal models using different relationship matrices. Genetics, selection, evolution : GSE, 52(1), [31]. https://doi.org/10.1186/s12711-020-00550-w

Tsai, H-Y., Janss, L. L., Andersen, J. R., Orabi, J., Jensen, J. D., Jahoor, A. & Jensen, J. (2020). Genomic prediction and GWAS of yield, quality and disease-related traits in spring barley and winter wheat. Scientific Reports, 10(1), [3347]. https://doi.org/10.1038/s41598-020-60203-2

Tsai, H-Y., Cericola, F., Edriss, V., Andersen, J. R., Orabi, J., Jensen, J. D., Jahoor, A., Janss, L. & Jensen, J. (2020). Use of multiple traits genomic prediction, genotype by environment interactions and spatial effect to improve prediction accuracy in yield data. PLOS ONE, 15(5), [e0232665]. https://doi.org/10.1371/journal.pone.0232665

Thomasen, J. R., Liu, H. & Sørensen, A. C. (2020). Genotyping more cows increases genetic gain and reduces rate of true inbreeding in a dairy cattle breeding scheme using female reproductive technologies. Journal of Dairy Science, 103(1), 597-606. https://doi.org/10.3168/jds.2019-16974

Tessema, B. B., Liu, H., Sørensen, A. C., Andersen, J. R. & Jensen, J. (2020). Strategies Using Genomic Selection to Increase Genetic Gain in Breeding Programs for Wheat. Frontiers in Genetics, 11, [578123]. https://doi.org/10.3389/fgene.2020.578123

Tausen, M., Clausen, M. M., Moeskjær, S., Shihavuddin, ASM., Dahl, A. B., Janss, L. & Andersen, S. U. (2020). Greenotyper: Image-based plant phenotyping using distributed computing and deep learning. Frontiers in Plant Science, 11, [1181]. https://doi.org/10.3389/fpls.2020.01181

Su, G., Sørensen, A. C., Chu, T. T., Meier, K., Nielsen, T. & Lund, M. S. (2020). Impact of phenotypic information and composition of reference population on genomic prediction in fish under the presence of genotype by environment interaction. Aquaculture, 526, [735358]. https://doi.org/10.1016/j.aquaculture.2020.735358

Slagboom, M., Hjortø, L., Sørensen, A. C., Mulder, H. A., Thomasen, J. R. & Kargo, M. (2020). Possibilities for a specific breeding program for organic dairy production. Journal of Dairy Science, 103(7), 6332-6345. https://doi.org/10.3168/jds.2019-16900

Schonherz, A. A., Szekeres, B. D., Nielsen, V. H. & Guldbrandtsen, B. (2020). Population structure and genetic characterization of two native Danish sheep breeds. Acta Agriculturae Scandinavica, Section A - Animal Science, 69(1-2), 53-67. https://doi.org/10.1080/09064702.2019.1639804

Rohde, P. D., Fourie Sørensen, I. & Sørensen, P. (2020). qgg: an R package for large-scale quantitative genetic analyses. Bioinformatics (Oxford, England), 36(8), 2614-2615. https://doi.org/10.1093/bioinformatics/btz955

Poulsen, B. G., Nielsen, B., Ostersen, T. & Christensen, O. F. (2020). Genetic associations between stayability and longevity in commercial crossbred sows, and stayability in multiplier sows. Journal of Animal Science, 98(6), [skaa183]. https://doi.org/10.1093/jas/skaa183

Poulsen, N. A., Szekeres, B. D., Kargo, M. & Larsen, L. B. (2020). Mineral and fatty acid composition of milk from native Jutland and Danish Red 1970 cattle breeds. Acta Agriculturae Scandinavica A: Animal Sciences, 69(1-2), 131-135. https://doi.org/10.1080/09064702.2019.1674914

Poulsen, B. G., Ask, B., Nielsen, H. M., Ostersen, T. & Christensen, O. F. (2020). Prediction of genetic merit for growth rate in pigs using animal models with indirect genetic effects and genomic information. Genetics, selection, evolution : GSE, 52, [58]. https://doi.org/10.1186/s12711-020-00578-y

Poulsen, N. A., Hein, L., Kargo, M. & Buitenhuis, A. J. (2020). Realization of breeding values for milk fatty acids in relation to seasonal variation in organic milk. Journal of Dairy Science, 103(3), 2434-2441. https://doi.org/10.3168/jds.2019-17065

Olijhoek, D. W., Difford, G. F., Lund, P. & Løvendahl, P. (2020). Phenotypic modeling of residual feed intake using physical activity and methane production as energy sinks. Journal of Dairy Science, 103(8), 6967-6981. https://doi.org/10.3168/jds.2019-17489

Nielsen, H. M. & Kargo, M. (2020). An endangered horse breed can be conserved by using optimum contribution selection and preselection of stallions. Acta Agriculturae Scandinavica, Section A - Animal Science, 69(1-2), 127-130. https://doi.org/10.1080/09064702.2020.1728370

Munksgaard, L., Weisbjerg, M. R., Henriksen, J. C. S. & Løvendahl, P. (2020). Changes to steps, lying, and eating behavior during lactation in Jersey and Holstein cows and the relationship to feed intake, yield, and weight. Journal of Dairy Science, 103(5), 4643-4653. https://doi.org/10.3168/jds.2019-17565

Morgante, F., Huang, W., Sørensen, P., Maltecca, C. & Mackay, T. F. C. (2020). Leveraging Multiple Layers of Data To Predict Drosophila Complex Traits. G3 (Bethesda, Md.), 10(12), 4599-4613. https://doi.org/10.1534/g3.120.401847

Mao, X., Sahana, G., Johansson, A. M., Liu, A., Ismael, A., Løvendahl, P., De Koning, D-J. & Guldbrandtsen, B. (2020). Genome-wide association mapping for dominance effects in female fertility using real and simulated data from Danish Holstein cattle. Scientific Reports, 10, [2953]. https://doi.org/10.1038/s41598-020-59788-5

Manzanilla-Pech, C. I. V., Gordo, D., Difford, G. F., Løvendahl, P. & Lassen, J. (2020). Multitrait genomic prediction of methane emissions in Danish Holstein cattle. Journal of Dairy Science, 103(10), 9195-9206. https://doi.org/10.3168/jds.2019-17857

Mahmood, K., Orabi, J., Kristensen, P. S., Sarup, P., Jørgensen, L. N. & Jahoor, A. (2020). De novo transcriptome assembly, functional annotation, and expression profiling of rye (Secale cereale L.) hybrids inoculated with ergot (Claviceps purpurea). Scientific Reports, 10(1), [13475]. https://doi.org/10.1038/s41598-020-70406-2

Displaying results 1 to 100 out of 2672

Page 1

Revised 05.11.2021 -

Jette Odgaard Villemoes